Protein–RNA interactions for Protein: Q62472

Lcn4, Vomeronasal secretory protein 2, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lcn4Q62472 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lcn4Q62472 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.33■□□□□ 0.85
Lcn4Q62472 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lcn4Q62472 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Lcn4Q62472 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Lcn4Q62472 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lcn4Q62472 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lcn4Q62472 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lcn4Q62472 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lcn4Q62472 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lcn4Q62472 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Lcn4Q62472 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lcn4Q62472 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Lcn4Q62472 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lcn4Q62472 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lcn4Q62472 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.3■□□□□ 0.84
Lcn4Q62472 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lcn4Q62472 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lcn4Q62472 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lcn4Q62472 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lcn4Q62472 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lcn4Q62472 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lcn4Q62472 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Lcn4Q62472 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lcn4Q62472 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lcn4Q62472 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Lcn4Q62472 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lcn4Q62472 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lcn4Q62472 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Lcn4Q62472 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lcn4Q62472 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lcn4Q62472 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lcn4Q62472 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Lcn4Q62472 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lcn4Q62472 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lcn4Q62472 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lcn4Q62472 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lcn4Q62472 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lcn4Q62472 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lcn4Q62472 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lcn4Q62472 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lcn4Q62472 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lcn4Q62472 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Lcn4Q62472 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Lcn4Q62472 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lcn4Q62472 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lcn4Q62472 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lcn4Q62472 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Lcn4Q62472 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lcn4Q62472 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.23■□□□□ 0.83
Lcn4Q62472 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.22■□□□□ 0.83
Lcn4Q62472 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Lcn4Q62472 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lcn4Q62472 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Lcn4Q62472 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lcn4Q62472 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lcn4Q62472 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lcn4Q62472 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lcn4Q62472 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lcn4Q62472 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Lcn4Q62472 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lcn4Q62472 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcn4Q62472 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lcn4Q62472 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
Lcn4Q62472 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcn4Q62472 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lcn4Q62472 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcn4Q62472 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
Lcn4Q62472 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.18■□□□□ 0.82
Lcn4Q62472 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcn4Q62472 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lcn4Q62472 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.18■□□□□ 0.82
Lcn4Q62472 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Lcn4Q62472 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lcn4Q62472 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcn4Q62472 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcn4Q62472 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lcn4Q62472 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lcn4Q62472 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lcn4Q62472 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lcn4Q62472 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lcn4Q62472 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.16■□□□□ 0.82
Lcn4Q62472 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lcn4Q62472 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Lcn4Q62472 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lcn4Q62472 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lcn4Q62472 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lcn4Q62472 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lcn4Q62472 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lcn4Q62472 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
Lcn4Q62472 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Lcn4Q62472 Nkain2-201ENSMUST00000092602 558 ntBASIC20.14■□□□□ 0.81
Lcn4Q62472 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lcn4Q62472 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lcn4Q62472 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lcn4Q62472 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lcn4Q62472 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lcn4Q62472 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lcn4Q62472 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lcn4Q62472 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms