Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Vps13aQ5H8C4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.99■■□□□ 1.43
Vps13aQ5H8C4 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.99■■□□□ 1.43
Vps13aQ5H8C4 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vps13aQ5H8C4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Vps13aQ5H8C4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.98■■□□□ 1.43
Vps13aQ5H8C4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Vps13aQ5H8C4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Vps13aQ5H8C4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vps13aQ5H8C4 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Vps13aQ5H8C4 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.95■■□□□ 1.43
Vps13aQ5H8C4 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.95■■□□□ 1.42
Vps13aQ5H8C4 Gm15820-201ENSMUST00000201566 728 ntBASIC23.94■■□□□ 1.42
Vps13aQ5H8C4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Vps13aQ5H8C4 Mir3960-201ENSMUST00000198213 73 ntBASIC23.94■■□□□ 1.42
Vps13aQ5H8C4 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.94■■□□□ 1.42
Vps13aQ5H8C4 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Vps13aQ5H8C4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Vps13aQ5H8C4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Vps13aQ5H8C4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.91■■□□□ 1.42
Vps13aQ5H8C4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.91■■□□□ 1.42
Vps13aQ5H8C4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Vps13aQ5H8C4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Vps13aQ5H8C4 Rps24-207ENSMUST00000224568 714 ntBASIC23.91■■□□□ 1.42
Vps13aQ5H8C4 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Vps13aQ5H8C4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Vps13aQ5H8C4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Vps13aQ5H8C4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Vps13aQ5H8C4 Serp2-204ENSMUST00000228055 705 ntBASIC23.9■■□□□ 1.42
Vps13aQ5H8C4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Vps13aQ5H8C4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.89■■□□□ 1.42
Vps13aQ5H8C4 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Vps13aQ5H8C4 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.89■■□□□ 1.41
Vps13aQ5H8C4 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Vps13aQ5H8C4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.89■■□□□ 1.41
Vps13aQ5H8C4 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps13aQ5H8C4 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps13aQ5H8C4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vps13aQ5H8C4 Gm45102-201ENSMUST00000207427 857 ntBASIC23.87■■□□□ 1.41
Vps13aQ5H8C4 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.87■■□□□ 1.41
Vps13aQ5H8C4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.87■■□□□ 1.41
Vps13aQ5H8C4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Vps13aQ5H8C4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vps13aQ5H8C4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vps13aQ5H8C4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Vps13aQ5H8C4 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.86■■□□□ 1.41
Vps13aQ5H8C4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.86■■□□□ 1.41
Vps13aQ5H8C4 Gm14117-201ENSMUST00000122417 843 ntBASIC23.85■■□□□ 1.41
Vps13aQ5H8C4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
Vps13aQ5H8C4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Vps13aQ5H8C4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
Vps13aQ5H8C4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vps13aQ5H8C4 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vps13aQ5H8C4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Vps13aQ5H8C4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vps13aQ5H8C4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Vps13aQ5H8C4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Vps13aQ5H8C4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Vps13aQ5H8C4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
Vps13aQ5H8C4 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.81■■□□□ 1.4
Vps13aQ5H8C4 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.81■■□□□ 1.4
Vps13aQ5H8C4 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.8■■□□□ 1.4
Vps13aQ5H8C4 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
Vps13aQ5H8C4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Vps13aQ5H8C4 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Vps13aQ5H8C4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Vps13aQ5H8C4 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps13aQ5H8C4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.79■■□□□ 1.4
Vps13aQ5H8C4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps13aQ5H8C4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Vps13aQ5H8C4 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.78■■□□□ 1.4
Vps13aQ5H8C4 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.78■■□□□ 1.4
Vps13aQ5H8C4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Vps13aQ5H8C4 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Vps13aQ5H8C4 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.77■■□□□ 1.39
Vps13aQ5H8C4 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.39
Vps13aQ5H8C4 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Vps13aQ5H8C4 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vps13aQ5H8C4 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Vps13aQ5H8C4 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Vps13aQ5H8C4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
Vps13aQ5H8C4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Vps13aQ5H8C4 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
Vps13aQ5H8C4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vps13aQ5H8C4 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Vps13aQ5H8C4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps13aQ5H8C4 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Vps13aQ5H8C4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Vps13aQ5H8C4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps13aQ5H8C4 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps13aQ5H8C4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps13aQ5H8C4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Vps13aQ5H8C4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Vps13aQ5H8C4 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Vps13aQ5H8C4 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Vps13aQ5H8C4 Gm13238-201ENSMUST00000117655 780 ntBASIC23.7■■□□□ 1.38
Vps13aQ5H8C4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Vps13aQ5H8C4 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.7■■□□□ 1.38
Vps13aQ5H8C4 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Vps13aQ5H8C4 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms