Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
Nhej1Q3KNJ2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Nhej1Q3KNJ2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nhej1Q3KNJ2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nhej1Q3KNJ2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nhej1Q3KNJ2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
Nhej1Q3KNJ2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Nhej1Q3KNJ2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Nhej1Q3KNJ2 Gm45855-201ENSMUST00000212546 880 ntBASIC24.76■■□□□ 1.55
Nhej1Q3KNJ2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
Nhej1Q3KNJ2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
Nhej1Q3KNJ2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
Nhej1Q3KNJ2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Nhej1Q3KNJ2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
Nhej1Q3KNJ2 Il17rd-202ENSMUST00000223942 2186 ntBASIC24.74■■□□□ 1.55
Nhej1Q3KNJ2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Nhej1Q3KNJ2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Nhej1Q3KNJ2 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC24.73■■□□□ 1.55
Nhej1Q3KNJ2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
Nhej1Q3KNJ2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Nhej1Q3KNJ2 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
Nhej1Q3KNJ2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
Nhej1Q3KNJ2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC24.7■■□□□ 1.54
Nhej1Q3KNJ2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Nhej1Q3KNJ2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
Nhej1Q3KNJ2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Nhej1Q3KNJ2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Nhej1Q3KNJ2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Nhej1Q3KNJ2 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Nhej1Q3KNJ2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Nhej1Q3KNJ2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.67■■□□□ 1.54
Nhej1Q3KNJ2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Nhej1Q3KNJ2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Nhej1Q3KNJ2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Nhej1Q3KNJ2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
Nhej1Q3KNJ2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nhej1Q3KNJ2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.66■■□□□ 1.54
Nhej1Q3KNJ2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nhej1Q3KNJ2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
Nhej1Q3KNJ2 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC24.65■■□□□ 1.54
Nhej1Q3KNJ2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC24.64■■□□□ 1.54
Nhej1Q3KNJ2 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC24.64■■□□□ 1.54
Nhej1Q3KNJ2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
Nhej1Q3KNJ2 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nhej1Q3KNJ2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Nhej1Q3KNJ2 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nhej1Q3KNJ2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Nhej1Q3KNJ2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Nhej1Q3KNJ2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Nhej1Q3KNJ2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Nhej1Q3KNJ2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Nhej1Q3KNJ2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nhej1Q3KNJ2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC24.61■■□□□ 1.53
Nhej1Q3KNJ2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nhej1Q3KNJ2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Nhej1Q3KNJ2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
Nhej1Q3KNJ2 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC24.59■■□□□ 1.53
Nhej1Q3KNJ2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC24.58■■□□□ 1.53
Nhej1Q3KNJ2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Nhej1Q3KNJ2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Nhej1Q3KNJ2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Nhej1Q3KNJ2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC24.57■■□□□ 1.52
Nhej1Q3KNJ2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Nhej1Q3KNJ2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Nhej1Q3KNJ2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Nhej1Q3KNJ2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nhej1Q3KNJ2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nhej1Q3KNJ2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nhej1Q3KNJ2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Nhej1Q3KNJ2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Nhej1Q3KNJ2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Nhej1Q3KNJ2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Nhej1Q3KNJ2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Nhej1Q3KNJ2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Nhej1Q3KNJ2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Nhej1Q3KNJ2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Nhej1Q3KNJ2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Nhej1Q3KNJ2 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Nhej1Q3KNJ2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nhej1Q3KNJ2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Nhej1Q3KNJ2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nhej1Q3KNJ2 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Nhej1Q3KNJ2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Nhej1Q3KNJ2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Nhej1Q3KNJ2 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Nhej1Q3KNJ2 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Nhej1Q3KNJ2 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Nhej1Q3KNJ2 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.5■■□□□ 1.51
Nhej1Q3KNJ2 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
Nhej1Q3KNJ2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Nhej1Q3KNJ2 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
Nhej1Q3KNJ2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Nhej1Q3KNJ2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
Nhej1Q3KNJ2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Nhej1Q3KNJ2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nhej1Q3KNJ2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Nhej1Q3KNJ2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Nhej1Q3KNJ2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Nhej1Q3KNJ2 Gm42699-201ENSMUST00000198104 1657 ntBASIC24.46■■□□□ 1.51
Nhej1Q3KNJ2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms