Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Pkd1l3Q2EG98 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pkd1l3Q2EG98 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pkd1l3Q2EG98 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pkd1l3Q2EG98 Gm4799-201ENSMUST00000095396 657 ntBASIC21.01■□□□□ 0.95
Pkd1l3Q2EG98 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pkd1l3Q2EG98 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pkd1l3Q2EG98 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21■□□□□ 0.95
Pkd1l3Q2EG98 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkd1l3Q2EG98 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pkd1l3Q2EG98 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
Pkd1l3Q2EG98 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.98■□□□□ 0.95
Pkd1l3Q2EG98 Gm12366-201ENSMUST00000121722 873 ntBASIC20.98■□□□□ 0.95
Pkd1l3Q2EG98 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.98■□□□□ 0.95
Pkd1l3Q2EG98 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.98■□□□□ 0.95
Pkd1l3Q2EG98 Gm5786-201ENSMUST00000085368 882 ntBASIC20.98■□□□□ 0.95
Pkd1l3Q2EG98 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pkd1l3Q2EG98 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkd1l3Q2EG98 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pkd1l3Q2EG98 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.97■□□□□ 0.95
Pkd1l3Q2EG98 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.97■□□□□ 0.95
Pkd1l3Q2EG98 Mir3960-201ENSMUST00000198213 73 ntBASIC20.96■□□□□ 0.95
Pkd1l3Q2EG98 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pkd1l3Q2EG98 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.95■□□□□ 0.94
Pkd1l3Q2EG98 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pkd1l3Q2EG98 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pkd1l3Q2EG98 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pkd1l3Q2EG98 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.94■□□□□ 0.94
Pkd1l3Q2EG98 Scarna2-201ENSMUST00000157560 414 ntBASIC20.93■□□□□ 0.94
Pkd1l3Q2EG98 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.93■□□□□ 0.94
Pkd1l3Q2EG98 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkd1l3Q2EG98 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkd1l3Q2EG98 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkd1l3Q2EG98 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pkd1l3Q2EG98 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.93■□□□□ 0.94
Pkd1l3Q2EG98 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pkd1l3Q2EG98 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.92■□□□□ 0.94
Pkd1l3Q2EG98 Gm9806-201ENSMUST00000051080 552 ntBASIC20.92■□□□□ 0.94
Pkd1l3Q2EG98 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pkd1l3Q2EG98 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pkd1l3Q2EG98 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pkd1l3Q2EG98 Gm11687-201ENSMUST00000118911 886 ntBASIC20.9■□□□□ 0.94
Pkd1l3Q2EG98 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pkd1l3Q2EG98 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.9■□□□□ 0.94
Pkd1l3Q2EG98 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pkd1l3Q2EG98 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pkd1l3Q2EG98 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pkd1l3Q2EG98 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pkd1l3Q2EG98 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd1l3Q2EG98 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pkd1l3Q2EG98 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pkd1l3Q2EG98 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pkd1l3Q2EG98 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pkd1l3Q2EG98 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.85■□□□□ 0.93
Pkd1l3Q2EG98 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd1l3Q2EG98 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd1l3Q2EG98 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd1l3Q2EG98 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd1l3Q2EG98 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd1l3Q2EG98 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd1l3Q2EG98 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pkd1l3Q2EG98 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Pkd1l3Q2EG98 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.84■□□□□ 0.93
Pkd1l3Q2EG98 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.84■□□□□ 0.93
Pkd1l3Q2EG98 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pkd1l3Q2EG98 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pkd1l3Q2EG98 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pkd1l3Q2EG98 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pkd1l3Q2EG98 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pkd1l3Q2EG98 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pkd1l3Q2EG98 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pkd1l3Q2EG98 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pkd1l3Q2EG98 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.82■□□□□ 0.92
Pkd1l3Q2EG98 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pkd1l3Q2EG98 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.81■□□□□ 0.92
Pkd1l3Q2EG98 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.81■□□□□ 0.92
Pkd1l3Q2EG98 Gm7332-201ENSMUST00000118351 454 ntBASIC20.81■□□□□ 0.92
Pkd1l3Q2EG98 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.81■□□□□ 0.92
Pkd1l3Q2EG98 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pkd1l3Q2EG98 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pkd1l3Q2EG98 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pkd1l3Q2EG98 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pkd1l3Q2EG98 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pkd1l3Q2EG98 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pkd1l3Q2EG98 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pkd1l3Q2EG98 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pkd1l3Q2EG98 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.78■□□□□ 0.92
Pkd1l3Q2EG98 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pkd1l3Q2EG98 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.78■□□□□ 0.92
Pkd1l3Q2EG98 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pkd1l3Q2EG98 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pkd1l3Q2EG98 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.77■□□□□ 0.92
Pkd1l3Q2EG98 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pkd1l3Q2EG98 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pkd1l3Q2EG98 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pkd1l3Q2EG98 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.76■□□□□ 0.91
Pkd1l3Q2EG98 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Pkd1l3Q2EG98 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.76■□□□□ 0.91
Pkd1l3Q2EG98 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Pkd1l3Q2EG98 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms