Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.68■□□□□ 0.9
SgcbP82349 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.68■□□□□ 0.9
SgcbP82349 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SgcbP82349 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SgcbP82349 Gm37136-201ENSMUST00000194368 194 ntBASIC20.66■□□□□ 0.9
SgcbP82349 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SgcbP82349 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SgcbP82349 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SgcbP82349 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SgcbP82349 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.64■□□□□ 0.9
SgcbP82349 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SgcbP82349 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SgcbP82349 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SgcbP82349 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.64■□□□□ 0.89
SgcbP82349 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SgcbP82349 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SgcbP82349 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SgcbP82349 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SgcbP82349 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SgcbP82349 Gm4799-201ENSMUST00000095396 657 ntBASIC20.63■□□□□ 0.89
SgcbP82349 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SgcbP82349 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SgcbP82349 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SgcbP82349 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SgcbP82349 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SgcbP82349 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SgcbP82349 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SgcbP82349 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SgcbP82349 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.59■□□□□ 0.89
SgcbP82349 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SgcbP82349 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SgcbP82349 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SgcbP82349 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.58■□□□□ 0.89
SgcbP82349 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.58■□□□□ 0.89
SgcbP82349 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SgcbP82349 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SgcbP82349 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SgcbP82349 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SgcbP82349 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SgcbP82349 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SgcbP82349 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.57■□□□□ 0.88
SgcbP82349 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
SgcbP82349 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.56■□□□□ 0.88
SgcbP82349 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SgcbP82349 Gm6311-201ENSMUST00000073790 878 ntBASIC20.56■□□□□ 0.88
SgcbP82349 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SgcbP82349 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SgcbP82349 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SgcbP82349 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SgcbP82349 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SgcbP82349 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SgcbP82349 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SgcbP82349 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SgcbP82349 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SgcbP82349 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SgcbP82349 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SgcbP82349 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SgcbP82349 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SgcbP82349 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SgcbP82349 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SgcbP82349 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SgcbP82349 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SgcbP82349 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SgcbP82349 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SgcbP82349 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SgcbP82349 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.51■□□□□ 0.87
SgcbP82349 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SgcbP82349 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SgcbP82349 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SgcbP82349 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
SgcbP82349 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SgcbP82349 Mir3960-201ENSMUST00000198213 73 ntBASIC20.49■□□□□ 0.87
SgcbP82349 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.49■□□□□ 0.87
SgcbP82349 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SgcbP82349 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SgcbP82349 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SgcbP82349 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SgcbP82349 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SgcbP82349 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SgcbP82349 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SgcbP82349 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SgcbP82349 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SgcbP82349 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.47■□□□□ 0.87
SgcbP82349 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SgcbP82349 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.47■□□□□ 0.87
SgcbP82349 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SgcbP82349 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SgcbP82349 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.45■□□□□ 0.86
SgcbP82349 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
SgcbP82349 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SgcbP82349 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SgcbP82349 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.45■□□□□ 0.86
SgcbP82349 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SgcbP82349 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.45■□□□□ 0.86
SgcbP82349 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SgcbP82349 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SgcbP82349 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.44■□□□□ 0.86
SgcbP82349 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SgcbP82349 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.44■□□□□ 0.86
SgcbP82349 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms