Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC40.06■■■■■ 4
Cux2P70298 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC40.05■■■■■ 4
Cux2P70298 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC40.04■■■■■ 4
Cux2P70298 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC40.03■■■■■ 4
Cux2P70298 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC40.01■■■■■ 4
Cux2P70298 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC40■■■■□ 3.99
Cux2P70298 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC39.99■■■■□ 3.99
Cux2P70298 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC39.99■■■■□ 3.99
Cux2P70298 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC39.99■■■■□ 3.99
Cux2P70298 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC39.97■■■■□ 3.99
Cux2P70298 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC39.96■■■■□ 3.99
Cux2P70298 Gm9905-201ENSMUST00000065740 1845 ntBASIC39.96■■■■□ 3.99
Cux2P70298 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC39.96■■■■□ 3.99
Cux2P70298 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC39.95■■■■□ 3.99
Cux2P70298 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC39.95■■■■□ 3.99
Cux2P70298 Gm5522-201ENSMUST00000189483 1242 ntBASIC39.95■■■■□ 3.99
Cux2P70298 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC39.95■■■■□ 3.99
Cux2P70298 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
Cux2P70298 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC39.94■■■■□ 3.98
Cux2P70298 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC39.94■■■■□ 3.98
Cux2P70298 AC122317.2-201ENSMUST00000218708 1248 ntBASIC39.94■■■■□ 3.98
Cux2P70298 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC39.93■■■■□ 3.98
Cux2P70298 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC39.93■■■■□ 3.98
Cux2P70298 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC39.92■■■■□ 3.98
Cux2P70298 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC39.92■■■■□ 3.98
Cux2P70298 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC39.92■■■■□ 3.98
Cux2P70298 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC39.91■■■■□ 3.98
Cux2P70298 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC39.91■■■■□ 3.98
Cux2P70298 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC39.9■■■■□ 3.98
Cux2P70298 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC39.9■■■■□ 3.98
Cux2P70298 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC39.89■■■■□ 3.98
Cux2P70298 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC39.89■■■■□ 3.98
Cux2P70298 Gm9812-201ENSMUST00000061934 968 ntBASIC39.89■■■■□ 3.98
Cux2P70298 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC39.88■■■■□ 3.97
Cux2P70298 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC39.87■■■■□ 3.97
Cux2P70298 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC39.87■■■■□ 3.97
Cux2P70298 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC39.86■■■■□ 3.97
Cux2P70298 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC39.86■■■■□ 3.97
Cux2P70298 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC39.85■■■■□ 3.97
Cux2P70298 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC39.85■■■■□ 3.97
Cux2P70298 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC39.82■■■■□ 3.97
Cux2P70298 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC39.81■■■■□ 3.96
Cux2P70298 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC39.81■■■■□ 3.96
Cux2P70298 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC39.81■■■■□ 3.96
Cux2P70298 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC39.8■■■■□ 3.96
Cux2P70298 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC39.79■■■■□ 3.96
Cux2P70298 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC39.77■■■■□ 3.96
Cux2P70298 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Cux2P70298 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC39.77■■■■□ 3.96
Cux2P70298 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC39.76■■■■□ 3.96
Cux2P70298 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC39.75■■■■□ 3.95
Cux2P70298 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC39.74■■■■□ 3.95
Cux2P70298 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC39.74■■■■□ 3.95
Cux2P70298 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC39.74■■■■□ 3.95
Cux2P70298 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
Cux2P70298 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
Cux2P70298 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC39.73■■■■□ 3.95
Cux2P70298 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC39.73■■■■□ 3.95
Cux2P70298 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC39.73■■■■□ 3.95
Cux2P70298 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC39.72■■■■□ 3.95
Cux2P70298 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC39.72■■■■□ 3.95
Cux2P70298 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC39.72■■■■□ 3.95
Cux2P70298 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC39.71■■■■□ 3.95
Cux2P70298 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC39.71■■■■□ 3.95
Cux2P70298 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC39.71■■■■□ 3.95
Cux2P70298 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC39.71■■■■□ 3.95
Cux2P70298 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC39.7■■■■□ 3.95
Cux2P70298 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
Cux2P70298 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC39.69■■■■□ 3.94
Cux2P70298 AC093043.1-201ENSMUST00000226700 898 ntBASIC39.68■■■■□ 3.94
Cux2P70298 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC39.67■■■■□ 3.94
Cux2P70298 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC39.67■■■■□ 3.94
Cux2P70298 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Cux2P70298 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC39.66■■■■□ 3.94
Cux2P70298 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC39.66■■■■□ 3.94
Cux2P70298 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC39.65■■■■□ 3.94
Cux2P70298 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
Cux2P70298 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC39.64■■■■□ 3.94
Cux2P70298 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC39.63■■■■□ 3.94
Cux2P70298 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC39.63■■■■□ 3.94
Cux2P70298 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC39.63■■■■□ 3.93
Cux2P70298 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC39.63■■■■□ 3.93
Cux2P70298 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
Cux2P70298 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC39.62■■■■□ 3.93
Cux2P70298 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC39.62■■■■□ 3.93
Cux2P70298 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC39.62■■■■□ 3.93
Cux2P70298 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC39.61■■■■□ 3.93
Cux2P70298 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC39.6■■■■□ 3.93
Cux2P70298 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
Cux2P70298 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
Cux2P70298 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC39.58■■■■□ 3.93
Cux2P70298 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
Cux2P70298 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC39.58■■■■□ 3.93
Cux2P70298 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.93
Cux2P70298 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC39.57■■■■□ 3.92
Cux2P70298 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC39.56■■■■□ 3.92
Cux2P70298 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC39.56■■■■□ 3.92
Cux2P70298 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC39.55■■■■□ 3.92
Cux2P70298 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC39.54■■■■□ 3.92
Cux2P70298 Rps24-207ENSMUST00000224568 714 ntBASIC39.54■■■■□ 3.92
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms