Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pdlim4P70271 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim4P70271 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pdlim4P70271 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.17■□□□□ 0.66
Pdlim4P70271 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.17■□□□□ 0.66
Pdlim4P70271 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.17■□□□□ 0.66
Pdlim4P70271 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Pdlim4P70271 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pdlim4P70271 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pdlim4P70271 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim4P70271 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pdlim4P70271 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.15■□□□□ 0.66
Pdlim4P70271 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pdlim4P70271 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Pdlim4P70271 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim4P70271 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pdlim4P70271 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.13■□□□□ 0.65
Pdlim4P70271 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim4P70271 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
Pdlim4P70271 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pdlim4P70271 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim4P70271 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Pdlim4P70271 Gm11599-201ENSMUST00000118720 878 ntBASIC19.12■□□□□ 0.65
Pdlim4P70271 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pdlim4P70271 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim4P70271 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim4P70271 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Pdlim4P70271 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim4P70271 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Pdlim4P70271 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Pdlim4P70271 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim4P70271 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim4P70271 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.1■□□□□ 0.65
Pdlim4P70271 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.1■□□□□ 0.65
Pdlim4P70271 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim4P70271 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim4P70271 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim4P70271 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.1■□□□□ 0.65
Pdlim4P70271 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Pdlim4P70271 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim4P70271 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.09■□□□□ 0.65
Pdlim4P70271 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim4P70271 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pdlim4P70271 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Pdlim4P70271 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Pdlim4P70271 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim4P70271 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Pdlim4P70271 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Pdlim4P70271 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim4P70271 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Pdlim4P70271 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim4P70271 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim4P70271 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.07■□□□□ 0.64
Pdlim4P70271 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim4P70271 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.07■□□□□ 0.64
Pdlim4P70271 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim4P70271 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim4P70271 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim4P70271 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim4P70271 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Pdlim4P70271 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim4P70271 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Pdlim4P70271 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
Pdlim4P70271 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim4P70271 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim4P70271 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.05■□□□□ 0.64
Pdlim4P70271 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim4P70271 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim4P70271 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.04■□□□□ 0.64
Pdlim4P70271 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim4P70271 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim4P70271 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim4P70271 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim4P70271 Gm37136-201ENSMUST00000194368 194 ntBASIC19.03■□□□□ 0.64
Pdlim4P70271 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim4P70271 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim4P70271 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim4P70271 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim4P70271 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim4P70271 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim4P70271 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim4P70271 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim4P70271 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim4P70271 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Pdlim4P70271 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim4P70271 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim4P70271 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim4P70271 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim4P70271 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim4P70271 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.98■□□□□ 0.63
Pdlim4P70271 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim4P70271 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pdlim4P70271 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim4P70271 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim4P70271 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim4P70271 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim4P70271 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.95■□□□□ 0.62
Pdlim4P70271 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim4P70271 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim4P70271 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms