Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Hmgcs2P54869 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
Hmgcs2P54869 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.48■■□□□ 1.83
Hmgcs2P54869 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
Hmgcs2P54869 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.47■■□□□ 1.83
Hmgcs2P54869 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
Hmgcs2P54869 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Hmgcs2P54869 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Hmgcs2P54869 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hmgcs2P54869 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hmgcs2P54869 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hmgcs2P54869 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hmgcs2P54869 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Hmgcs2P54869 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Hmgcs2P54869 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
Hmgcs2P54869 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Hmgcs2P54869 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
Hmgcs2P54869 Gm7332-201ENSMUST00000118351 454 ntBASIC26.44■■□□□ 1.82
Hmgcs2P54869 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
Hmgcs2P54869 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hmgcs2P54869 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hmgcs2P54869 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Hmgcs2P54869 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Hmgcs2P54869 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Hmgcs2P54869 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
Hmgcs2P54869 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.41■■□□□ 1.82
Hmgcs2P54869 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.41■■□□□ 1.82
Hmgcs2P54869 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.4■■□□□ 1.82
Hmgcs2P54869 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.4■■□□□ 1.82
Hmgcs2P54869 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26.39■■□□□ 1.82
Hmgcs2P54869 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.39■■□□□ 1.82
Hmgcs2P54869 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
Hmgcs2P54869 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Hmgcs2P54869 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Hmgcs2P54869 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hmgcs2P54869 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hmgcs2P54869 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Hmgcs2P54869 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hmgcs2P54869 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hmgcs2P54869 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Hmgcs2P54869 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.38■■□□□ 1.81
Hmgcs2P54869 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.37■■□□□ 1.81
Hmgcs2P54869 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
Hmgcs2P54869 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
Hmgcs2P54869 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Hmgcs2P54869 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Hmgcs2P54869 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Hmgcs2P54869 Gm9812-201ENSMUST00000061934 968 ntBASIC26.35■■□□□ 1.81
Hmgcs2P54869 Gm14523-201ENSMUST00000117260 558 ntBASIC26.34■■□□□ 1.81
Hmgcs2P54869 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Hmgcs2P54869 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hmgcs2P54869 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hmgcs2P54869 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hmgcs2P54869 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Hmgcs2P54869 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.33■■□□□ 1.81
Hmgcs2P54869 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.33■■□□□ 1.81
Hmgcs2P54869 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Hmgcs2P54869 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Hmgcs2P54869 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hmgcs2P54869 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Hmgcs2P54869 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hmgcs2P54869 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Hmgcs2P54869 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26.3■■□□□ 1.8
Hmgcs2P54869 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Hmgcs2P54869 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.3■■□□□ 1.8
Hmgcs2P54869 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hmgcs2P54869 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Hmgcs2P54869 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hmgcs2P54869 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC26.28■■□□□ 1.8
Hmgcs2P54869 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hmgcs2P54869 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Hmgcs2P54869 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Hmgcs2P54869 AC151971.4-201ENSMUST00000214717 704 ntBASIC26.27■■□□□ 1.8
Hmgcs2P54869 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Hmgcs2P54869 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hmgcs2P54869 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Hmgcs2P54869 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hmgcs2P54869 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Hmgcs2P54869 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hmgcs2P54869 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
Hmgcs2P54869 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hmgcs2P54869 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Hmgcs2P54869 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hmgcs2P54869 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.24■■□□□ 1.79
Hmgcs2P54869 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Hmgcs2P54869 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Hmgcs2P54869 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Hmgcs2P54869 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Hmgcs2P54869 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.22■■□□□ 1.79
Hmgcs2P54869 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Hmgcs2P54869 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
Hmgcs2P54869 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.19■■□□□ 1.78
Hmgcs2P54869 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Hmgcs2P54869 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.18■■□□□ 1.78
Hmgcs2P54869 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Hmgcs2P54869 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Hmgcs2P54869 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.17■■□□□ 1.78
Hmgcs2P54869 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Hmgcs2P54869 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Hmgcs2P54869 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms