Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Rfx3P48381 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rfx3P48381 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx3P48381 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx3P48381 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rfx3P48381 Gm30023-201ENSMUST00000197970 889 ntBASIC20.84■□□□□ 0.93
Rfx3P48381 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.84■□□□□ 0.93
Rfx3P48381 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rfx3P48381 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.83■□□□□ 0.93
Rfx3P48381 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.83■□□□□ 0.93
Rfx3P48381 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx3P48381 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rfx3P48381 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx3P48381 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Rfx3P48381 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rfx3P48381 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx3P48381 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rfx3P48381 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.81■□□□□ 0.92
Rfx3P48381 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Rfx3P48381 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx3P48381 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx3P48381 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx3P48381 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rfx3P48381 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx3P48381 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx3P48381 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx3P48381 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx3P48381 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rfx3P48381 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx3P48381 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx3P48381 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rfx3P48381 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx3P48381 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx3P48381 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.77■□□□□ 0.92
Rfx3P48381 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.77■□□□□ 0.92
Rfx3P48381 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx3P48381 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rfx3P48381 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx3P48381 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx3P48381 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.76■□□□□ 0.91
Rfx3P48381 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx3P48381 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx3P48381 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx3P48381 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.76■□□□□ 0.91
Rfx3P48381 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx3P48381 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx3P48381 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx3P48381 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Rfx3P48381 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx3P48381 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx3P48381 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx3P48381 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx3P48381 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Rfx3P48381 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx3P48381 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx3P48381 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx3P48381 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx3P48381 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx3P48381 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx3P48381 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx3P48381 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.73■□□□□ 0.91
Rfx3P48381 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Rfx3P48381 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx3P48381 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx3P48381 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.72■□□□□ 0.91
Rfx3P48381 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
Rfx3P48381 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx3P48381 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx3P48381 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx3P48381 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx3P48381 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx3P48381 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx3P48381 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx3P48381 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx3P48381 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx3P48381 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx3P48381 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rfx3P48381 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx3P48381 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
Rfx3P48381 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx3P48381 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Rfx3P48381 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Rfx3P48381 Nkain2-201ENSMUST00000092602 558 ntBASIC20.68■□□□□ 0.9
Rfx3P48381 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx3P48381 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx3P48381 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
Rfx3P48381 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Rfx3P48381 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx3P48381 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.66■□□□□ 0.9
Rfx3P48381 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfx3P48381 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rfx3P48381 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx3P48381 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfx3P48381 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfx3P48381 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx3P48381 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Rfx3P48381 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rfx3P48381 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfx3P48381 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfx3P48381 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms