Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ly6c1P0CW02 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ly6c1P0CW02 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ly6c1P0CW02 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ly6c1P0CW02 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ly6c1P0CW02 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ly6c1P0CW02 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ly6c1P0CW02 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ly6c1P0CW02 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ly6c1P0CW02 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ly6c1P0CW02 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ly6c1P0CW02 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.46■□□□□ 0.71
Ly6c1P0CW02 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ly6c1P0CW02 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ly6c1P0CW02 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Ly6c1P0CW02 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ly6c1P0CW02 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.44■□□□□ 0.7
Ly6c1P0CW02 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.44■□□□□ 0.7
Ly6c1P0CW02 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ly6c1P0CW02 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ly6c1P0CW02 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ly6c1P0CW02 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ly6c1P0CW02 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ly6c1P0CW02 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.43■□□□□ 0.7
Ly6c1P0CW02 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ly6c1P0CW02 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Ly6c1P0CW02 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.42■□□□□ 0.7
Ly6c1P0CW02 Gm4799-201ENSMUST00000095396 657 ntBASIC19.42■□□□□ 0.7
Ly6c1P0CW02 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.42■□□□□ 0.7
Ly6c1P0CW02 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ly6c1P0CW02 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ly6c1P0CW02 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ly6c1P0CW02 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ly6c1P0CW02 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ly6c1P0CW02 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Ly6c1P0CW02 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ly6c1P0CW02 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.41■□□□□ 0.7
Ly6c1P0CW02 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ly6c1P0CW02 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC19.4■□□□□ 0.7
Ly6c1P0CW02 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ly6c1P0CW02 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ly6c1P0CW02 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.39■□□□□ 0.69
Ly6c1P0CW02 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ly6c1P0CW02 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.38■□□□□ 0.69
Ly6c1P0CW02 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ly6c1P0CW02 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
Ly6c1P0CW02 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ly6c1P0CW02 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ly6c1P0CW02 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Ly6c1P0CW02 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ly6c1P0CW02 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.37■□□□□ 0.69
Ly6c1P0CW02 Gm6311-201ENSMUST00000073790 878 ntBASIC19.37■□□□□ 0.69
Ly6c1P0CW02 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ly6c1P0CW02 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ly6c1P0CW02 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ly6c1P0CW02 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ly6c1P0CW02 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.36■□□□□ 0.69
Ly6c1P0CW02 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ly6c1P0CW02 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Ly6c1P0CW02 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ly6c1P0CW02 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ly6c1P0CW02 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ly6c1P0CW02 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ly6c1P0CW02 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ly6c1P0CW02 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ly6c1P0CW02 Mir3960-201ENSMUST00000198213 73 ntBASIC19.33■□□□□ 0.68
Ly6c1P0CW02 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ly6c1P0CW02 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ly6c1P0CW02 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ly6c1P0CW02 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ly6c1P0CW02 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC19.32■□□□□ 0.68
Ly6c1P0CW02 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ly6c1P0CW02 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ly6c1P0CW02 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.32■□□□□ 0.68
Ly6c1P0CW02 Gm45364-201ENSMUST00000210883 159 ntBASIC19.31■□□□□ 0.68
Ly6c1P0CW02 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.31■□□□□ 0.68
Ly6c1P0CW02 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ly6c1P0CW02 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.3■□□□□ 0.68
Ly6c1P0CW02 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ly6c1P0CW02 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.29■□□□□ 0.68
Ly6c1P0CW02 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.29■□□□□ 0.68
Ly6c1P0CW02 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.29■□□□□ 0.68
Ly6c1P0CW02 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.29■□□□□ 0.68
Ly6c1P0CW02 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ly6c1P0CW02 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ly6c1P0CW02 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ly6c1P0CW02 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ly6c1P0CW02 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ly6c1P0CW02 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ly6c1P0CW02 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ly6c1P0CW02 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ly6c1P0CW02 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms