Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PrnpP04925 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
PrnpP04925 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PrnpP04925 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
PrnpP04925 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
PrnpP04925 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PrnpP04925 Gm7332-201ENSMUST00000118351 454 ntBASIC24.63■■□□□ 1.53
PrnpP04925 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PrnpP04925 Gm27502-201ENSMUST00000183495 199 ntBASIC24.63■■□□□ 1.53
PrnpP04925 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.63■■□□□ 1.53
PrnpP04925 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PrnpP04925 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.63■■□□□ 1.53
PrnpP04925 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PrnpP04925 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC24.63■■□□□ 1.53
PrnpP04925 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
PrnpP04925 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PrnpP04925 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PrnpP04925 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
PrnpP04925 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PrnpP04925 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
PrnpP04925 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PrnpP04925 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PrnpP04925 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
PrnpP04925 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PrnpP04925 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC24.58■■□□□ 1.53
PrnpP04925 Gm9812-201ENSMUST00000061934 968 ntBASIC24.58■■□□□ 1.53
PrnpP04925 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.52
PrnpP04925 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PrnpP04925 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
PrnpP04925 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.56■■□□□ 1.52
PrnpP04925 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PrnpP04925 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
PrnpP04925 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PrnpP04925 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PrnpP04925 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
PrnpP04925 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.54■■□□□ 1.52
PrnpP04925 Gm9910-201ENSMUST00000195385 1550 ntBASIC24.54■■□□□ 1.52
PrnpP04925 Gm43445-201ENSMUST00000198564 2091 ntBASIC24.54■■□□□ 1.52
PrnpP04925 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PrnpP04925 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.54■■□□□ 1.52
PrnpP04925 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PrnpP04925 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.53■■□□□ 1.52
PrnpP04925 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PrnpP04925 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PrnpP04925 Gm14523-201ENSMUST00000117260 558 ntBASIC24.52■■□□□ 1.52
PrnpP04925 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PrnpP04925 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PrnpP04925 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PrnpP04925 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PrnpP04925 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.51■■□□□ 1.51
PrnpP04925 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PrnpP04925 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PrnpP04925 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
PrnpP04925 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PrnpP04925 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PrnpP04925 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
PrnpP04925 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
PrnpP04925 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PrnpP04925 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
PrnpP04925 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PrnpP04925 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PrnpP04925 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PrnpP04925 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PrnpP04925 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
PrnpP04925 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC24.45■■□□□ 1.51
PrnpP04925 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
PrnpP04925 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PrnpP04925 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.44■■□□□ 1.5
PrnpP04925 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.44■■□□□ 1.5
PrnpP04925 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PrnpP04925 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.43■■□□□ 1.5
PrnpP04925 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PrnpP04925 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PrnpP04925 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PrnpP04925 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.41■■□□□ 1.5
PrnpP04925 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC24.41■■□□□ 1.5
PrnpP04925 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PrnpP04925 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PrnpP04925 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PrnpP04925 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.4■■□□□ 1.5
PrnpP04925 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.4■■□□□ 1.5
PrnpP04925 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PrnpP04925 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PrnpP04925 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PrnpP04925 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PrnpP04925 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PrnpP04925 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
PrnpP04925 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
PrnpP04925 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PrnpP04925 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.37■■□□□ 1.49
PrnpP04925 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PrnpP04925 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PrnpP04925 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PrnpP04925 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
PrnpP04925 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PrnpP04925 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
PrnpP04925 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.34■■□□□ 1.49
PrnpP04925 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.34■■□□□ 1.49
PrnpP04925 Gm14121-201ENSMUST00000121441 1380 ntBASIC24.34■■□□□ 1.49
PrnpP04925 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.34■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms