Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.03■□□□□ 0.96
Pdlim3O70209 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC21.03■□□□□ 0.96
Pdlim3O70209 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.02■□□□□ 0.96
Pdlim3O70209 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Pdlim3O70209 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Pdlim3O70209 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim3O70209 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim3O70209 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Pdlim3O70209 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Pdlim3O70209 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdlim3O70209 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Pdlim3O70209 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
Pdlim3O70209 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Pdlim3O70209 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pdlim3O70209 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.99■□□□□ 0.95
Pdlim3O70209 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim3O70209 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim3O70209 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC20.98■□□□□ 0.95
Pdlim3O70209 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim3O70209 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pdlim3O70209 Particl-201ENSMUST00000205370 1560 ntBASIC20.97■□□□□ 0.95
Pdlim3O70209 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.97■□□□□ 0.95
Pdlim3O70209 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.97■□□□□ 0.95
Pdlim3O70209 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pdlim3O70209 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim3O70209 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim3O70209 Gm30023-201ENSMUST00000197970 889 ntBASIC20.96■□□□□ 0.95
Pdlim3O70209 Zfp131-205ENSMUST00000223812 663 ntBASIC20.96■□□□□ 0.95
Pdlim3O70209 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim3O70209 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pdlim3O70209 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim3O70209 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pdlim3O70209 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.96■□□□□ 0.95
Pdlim3O70209 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Pdlim3O70209 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC20.95■□□□□ 0.94
Pdlim3O70209 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pdlim3O70209 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pdlim3O70209 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim3O70209 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim3O70209 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim3O70209 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim3O70209 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim3O70209 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.94■□□□□ 0.94
Pdlim3O70209 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pdlim3O70209 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
Pdlim3O70209 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim3O70209 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim3O70209 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pdlim3O70209 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdlim3O70209 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pdlim3O70209 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pdlim3O70209 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim3O70209 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim3O70209 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim3O70209 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim3O70209 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim3O70209 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pdlim3O70209 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pdlim3O70209 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Pdlim3O70209 Gm24970-201ENSMUST00000175582 82 ntBASIC20.89■□□□□ 0.93
Pdlim3O70209 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pdlim3O70209 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pdlim3O70209 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pdlim3O70209 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pdlim3O70209 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pdlim3O70209 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.87■□□□□ 0.93
Pdlim3O70209 Gm9397-201ENSMUST00000200125 605 ntBASIC20.87■□□□□ 0.93
Pdlim3O70209 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
Pdlim3O70209 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim3O70209 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pdlim3O70209 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.86■□□□□ 0.93
Pdlim3O70209 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim3O70209 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pdlim3O70209 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim3O70209 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pdlim3O70209 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.84■□□□□ 0.93
Pdlim3O70209 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim3O70209 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim3O70209 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim3O70209 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim3O70209 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.83■□□□□ 0.93
Pdlim3O70209 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Pdlim3O70209 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pdlim3O70209 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pdlim3O70209 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim3O70209 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim3O70209 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim3O70209 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim3O70209 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim3O70209 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim3O70209 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim3O70209 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim3O70209 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim3O70209 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim3O70209 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim3O70209 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pdlim3O70209 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim3O70209 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.78■□□□□ 0.92
Pdlim3O70209 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pdlim3O70209 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms