Protein–RNA interactions for Protein: O54689

Ccr6, C-C chemokine receptor type 6, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr6O54689 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Ccr6O54689 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ccr6O54689 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Ccr6O54689 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.64■□□□□ 0.73
Ccr6O54689 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ccr6O54689 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ccr6O54689 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr6O54689 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr6O54689 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ccr6O54689 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr6O54689 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr6O54689 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr6O54689 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr6O54689 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr6O54689 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccr6O54689 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccr6O54689 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccr6O54689 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccr6O54689 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccr6O54689 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccr6O54689 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ccr6O54689 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccr6O54689 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccr6O54689 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.58■□□□□ 0.72
Ccr6O54689 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ccr6O54689 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccr6O54689 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccr6O54689 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.57■□□□□ 0.72
Ccr6O54689 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ccr6O54689 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccr6O54689 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccr6O54689 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccr6O54689 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ccr6O54689 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ccr6O54689 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccr6O54689 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Ccr6O54689 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccr6O54689 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccr6O54689 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccr6O54689 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccr6O54689 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccr6O54689 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccr6O54689 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccr6O54689 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccr6O54689 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccr6O54689 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr6O54689 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr6O54689 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr6O54689 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr6O54689 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccr6O54689 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ccr6O54689 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr6O54689 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ccr6O54689 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ccr6O54689 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.49■□□□□ 0.71
Ccr6O54689 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr6O54689 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr6O54689 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr6O54689 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr6O54689 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr6O54689 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr6O54689 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccr6O54689 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr6O54689 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr6O54689 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccr6O54689 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccr6O54689 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccr6O54689 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr6O54689 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr6O54689 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr6O54689 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccr6O54689 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccr6O54689 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.47■□□□□ 0.71
Ccr6O54689 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr6O54689 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr6O54689 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr6O54689 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr6O54689 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccr6O54689 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccr6O54689 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ccr6O54689 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Ccr6O54689 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr6O54689 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr6O54689 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC19.44■□□□□ 0.7
Ccr6O54689 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr6O54689 Gm26115-201ENSMUST00000175605 87 ntBASIC19.44■□□□□ 0.7
Ccr6O54689 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
Ccr6O54689 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr6O54689 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr6O54689 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr6O54689 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr6O54689 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ccr6O54689 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.43■□□□□ 0.7
Ccr6O54689 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.43■□□□□ 0.7
Ccr6O54689 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.43■□□□□ 0.7
Ccr6O54689 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccr6O54689 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ccr6O54689 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ccr6O54689 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ccr6O54689 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms