Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Tnfrsf11bO08712 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Tnfrsf11bO08712 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.37
Tnfrsf11bO08712 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Tnfrsf11bO08712 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Tnfrsf11bO08712 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tnfrsf11bO08712 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tnfrsf11bO08712 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.63■■□□□ 1.37
Tnfrsf11bO08712 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Tnfrsf11bO08712 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Tnfrsf11bO08712 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Tnfrsf11bO08712 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Tnfrsf11bO08712 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
Tnfrsf11bO08712 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tnfrsf11bO08712 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Tnfrsf11bO08712 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
Tnfrsf11bO08712 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Tnfrsf11bO08712 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tnfrsf11bO08712 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Tnfrsf11bO08712 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Tnfrsf11bO08712 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Tnfrsf11bO08712 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Tnfrsf11bO08712 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Tnfrsf11bO08712 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Tnfrsf11bO08712 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Tnfrsf11bO08712 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tnfrsf11bO08712 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tnfrsf11bO08712 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Tnfrsf11bO08712 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Tnfrsf11bO08712 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Tnfrsf11bO08712 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Tnfrsf11bO08712 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
Tnfrsf11bO08712 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Tnfrsf11bO08712 Nkain2-201ENSMUST00000092602 558 ntBASIC23.57■■□□□ 1.36
Tnfrsf11bO08712 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC23.56■■□□□ 1.36
Tnfrsf11bO08712 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.56■■□□□ 1.36
Tnfrsf11bO08712 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Tnfrsf11bO08712 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.54■■□□□ 1.36
Tnfrsf11bO08712 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tnfrsf11bO08712 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Tnfrsf11bO08712 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Tnfrsf11bO08712 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Tnfrsf11bO08712 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.52■■□□□ 1.36
Tnfrsf11bO08712 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.52■■□□□ 1.36
Tnfrsf11bO08712 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Tnfrsf11bO08712 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
Tnfrsf11bO08712 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Tnfrsf11bO08712 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Tnfrsf11bO08712 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tnfrsf11bO08712 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.51■■□□□ 1.35
Tnfrsf11bO08712 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Tnfrsf11bO08712 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tnfrsf11bO08712 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tnfrsf11bO08712 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Tnfrsf11bO08712 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.5■■□□□ 1.35
Tnfrsf11bO08712 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Tnfrsf11bO08712 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Tnfrsf11bO08712 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Tnfrsf11bO08712 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tnfrsf11bO08712 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Tnfrsf11bO08712 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Tnfrsf11bO08712 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Tnfrsf11bO08712 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Tnfrsf11bO08712 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC23.47■■□□□ 1.35
Tnfrsf11bO08712 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.47■■□□□ 1.35
Tnfrsf11bO08712 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.47■■□□□ 1.35
Tnfrsf11bO08712 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tnfrsf11bO08712 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.45■■□□□ 1.34
Tnfrsf11bO08712 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tnfrsf11bO08712 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnfrsf11bO08712 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnfrsf11bO08712 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnfrsf11bO08712 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Tnfrsf11bO08712 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
Tnfrsf11bO08712 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnfrsf11bO08712 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnfrsf11bO08712 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tnfrsf11bO08712 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tnfrsf11bO08712 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tnfrsf11bO08712 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Tnfrsf11bO08712 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tnfrsf11bO08712 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tnfrsf11bO08712 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tnfrsf11bO08712 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tnfrsf11bO08712 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tnfrsf11bO08712 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tnfrsf11bO08712 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tnfrsf11bO08712 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tnfrsf11bO08712 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tnfrsf11bO08712 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tnfrsf11bO08712 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Tnfrsf11bO08712 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Tnfrsf11bO08712 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tnfrsf11bO08712 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tnfrsf11bO08712 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Tnfrsf11bO08712 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.36■■□□□ 1.33
Tnfrsf11bO08712 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.36■■□□□ 1.33
Tnfrsf11bO08712 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC23.36■■□□□ 1.33
Tnfrsf11bO08712 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tnfrsf11bO08712 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms