Protein–RNA interactions for Protein: J3QMS9

E030018B13Rik, RIKEN cDNA E030018B13 gene, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E030018B13RikJ3QMS9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
E030018B13RikJ3QMS9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.97■□□□□ 0.63
E030018B13RikJ3QMS9 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
E030018B13RikJ3QMS9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
E030018B13RikJ3QMS9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
E030018B13RikJ3QMS9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
E030018B13RikJ3QMS9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
E030018B13RikJ3QMS9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
E030018B13RikJ3QMS9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
E030018B13RikJ3QMS9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
E030018B13RikJ3QMS9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
E030018B13RikJ3QMS9 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
E030018B13RikJ3QMS9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
E030018B13RikJ3QMS9 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
E030018B13RikJ3QMS9 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
E030018B13RikJ3QMS9 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
E030018B13RikJ3QMS9 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
E030018B13RikJ3QMS9 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.93■□□□□ 0.62
E030018B13RikJ3QMS9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
E030018B13RikJ3QMS9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
E030018B13RikJ3QMS9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
E030018B13RikJ3QMS9 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
E030018B13RikJ3QMS9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
E030018B13RikJ3QMS9 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
E030018B13RikJ3QMS9 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC18.92■□□□□ 0.62
E030018B13RikJ3QMS9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 Gm13889-201ENSMUST00000099689 1386 ntBASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 Gm4419-202ENSMUST00000226239 1431 ntBASIC18.91■□□□□ 0.62
E030018B13RikJ3QMS9 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
E030018B13RikJ3QMS9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
E030018B13RikJ3QMS9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
E030018B13RikJ3QMS9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
E030018B13RikJ3QMS9 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
E030018B13RikJ3QMS9 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.89■□□□□ 0.61
E030018B13RikJ3QMS9 Gm4799-201ENSMUST00000095396 657 ntBASIC18.89■□□□□ 0.61
E030018B13RikJ3QMS9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC18.88■□□□□ 0.61
E030018B13RikJ3QMS9 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.88■□□□□ 0.61
E030018B13RikJ3QMS9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
E030018B13RikJ3QMS9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
E030018B13RikJ3QMS9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
E030018B13RikJ3QMS9 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.87■□□□□ 0.61
E030018B13RikJ3QMS9 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
E030018B13RikJ3QMS9 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
E030018B13RikJ3QMS9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
E030018B13RikJ3QMS9 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.86■□□□□ 0.61
E030018B13RikJ3QMS9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC18.86■□□□□ 0.61
E030018B13RikJ3QMS9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
E030018B13RikJ3QMS9 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
E030018B13RikJ3QMS9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
E030018B13RikJ3QMS9 Mir3960-201ENSMUST00000198213 73 ntBASIC18.84■□□□□ 0.61
E030018B13RikJ3QMS9 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
E030018B13RikJ3QMS9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
E030018B13RikJ3QMS9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
E030018B13RikJ3QMS9 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
E030018B13RikJ3QMS9 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
E030018B13RikJ3QMS9 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
E030018B13RikJ3QMS9 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
E030018B13RikJ3QMS9 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
E030018B13RikJ3QMS9 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC18.83■□□□□ 0.61
E030018B13RikJ3QMS9 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.83■□□□□ 0.6
E030018B13RikJ3QMS9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
E030018B13RikJ3QMS9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.83■□□□□ 0.6
E030018B13RikJ3QMS9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
E030018B13RikJ3QMS9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
E030018B13RikJ3QMS9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
E030018B13RikJ3QMS9 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
E030018B13RikJ3QMS9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.82■□□□□ 0.6
E030018B13RikJ3QMS9 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E030018B13RikJ3QMS9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E030018B13RikJ3QMS9 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
E030018B13RikJ3QMS9 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.81■□□□□ 0.6
E030018B13RikJ3QMS9 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
E030018B13RikJ3QMS9 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
E030018B13RikJ3QMS9 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
E030018B13RikJ3QMS9 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.79■□□□□ 0.6
E030018B13RikJ3QMS9 Gm9812-201ENSMUST00000061934 968 ntBASIC18.79■□□□□ 0.6
E030018B13RikJ3QMS9 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
E030018B13RikJ3QMS9 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E030018B13RikJ3QMS9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
E030018B13RikJ3QMS9 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E030018B13RikJ3QMS9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
E030018B13RikJ3QMS9 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E030018B13RikJ3QMS9 Gm45364-201ENSMUST00000210883 159 ntBASIC18.78■□□□□ 0.6
E030018B13RikJ3QMS9 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
E030018B13RikJ3QMS9 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
E030018B13RikJ3QMS9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
E030018B13RikJ3QMS9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.77■□□□□ 0.6
E030018B13RikJ3QMS9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E030018B13RikJ3QMS9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
E030018B13RikJ3QMS9 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E030018B13RikJ3QMS9 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
E030018B13RikJ3QMS9 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
E030018B13RikJ3QMS9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.76■□□□□ 0.59
E030018B13RikJ3QMS9 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms