Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
Ccdc188F6WEU2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ccdc188F6WEU2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Ccdc188F6WEU2 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.69■■□□□ 1.54
Ccdc188F6WEU2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
Ccdc188F6WEU2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Ccdc188F6WEU2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc188F6WEU2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC24.68■■□□□ 1.54
Ccdc188F6WEU2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Ccdc188F6WEU2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Ccdc188F6WEU2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.67■■□□□ 1.54
Ccdc188F6WEU2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Ccdc188F6WEU2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc188F6WEU2 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Ccdc188F6WEU2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24.65■■□□□ 1.54
Ccdc188F6WEU2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc188F6WEU2 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Ccdc188F6WEU2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Ccdc188F6WEU2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.64■■□□□ 1.54
Ccdc188F6WEU2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Ccdc188F6WEU2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Ccdc188F6WEU2 Gm13889-201ENSMUST00000099689 1386 ntBASIC24.64■■□□□ 1.53
Ccdc188F6WEU2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Ccdc188F6WEU2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Ccdc188F6WEU2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Ccdc188F6WEU2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.62■■□□□ 1.53
Ccdc188F6WEU2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
Ccdc188F6WEU2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Ccdc188F6WEU2 Gm13238-201ENSMUST00000117655 780 ntBASIC24.61■■□□□ 1.53
Ccdc188F6WEU2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
Ccdc188F6WEU2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc188F6WEU2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC24.6■■□□□ 1.53
Ccdc188F6WEU2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc188F6WEU2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Ccdc188F6WEU2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Ccdc188F6WEU2 Pcf11-205ENSMUST00000208255 1720 ntBASIC24.59■■□□□ 1.53
Ccdc188F6WEU2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.59■■□□□ 1.53
Ccdc188F6WEU2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Ccdc188F6WEU2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
Ccdc188F6WEU2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC24.58■■□□□ 1.53
Ccdc188F6WEU2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Ccdc188F6WEU2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
Ccdc188F6WEU2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc188F6WEU2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Ccdc188F6WEU2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc188F6WEU2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Ccdc188F6WEU2 Gm9959-201ENSMUST00000068277 390 ntBASIC24.55■■□□□ 1.52
Ccdc188F6WEU2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Ccdc188F6WEU2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
Ccdc188F6WEU2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Ccdc188F6WEU2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ccdc188F6WEU2 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC24.51■■□□□ 1.51
Ccdc188F6WEU2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc188F6WEU2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc188F6WEU2 Gm37136-201ENSMUST00000194368 194 ntBASIC24.5■■□□□ 1.51
Ccdc188F6WEU2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc188F6WEU2 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC24.5■■□□□ 1.51
Ccdc188F6WEU2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Ccdc188F6WEU2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc188F6WEU2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ccdc188F6WEU2 Gm45444-201ENSMUST00000211394 898 ntBASIC24.49■■□□□ 1.51
Ccdc188F6WEU2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC24.49■■□□□ 1.51
Ccdc188F6WEU2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.48■■□□□ 1.51
Ccdc188F6WEU2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ccdc188F6WEU2 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC24.48■■□□□ 1.51
Ccdc188F6WEU2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.48■■□□□ 1.51
Ccdc188F6WEU2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc188F6WEU2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ccdc188F6WEU2 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
Ccdc188F6WEU2 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc188F6WEU2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ccdc188F6WEU2 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
Ccdc188F6WEU2 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC24.46■■□□□ 1.51
Ccdc188F6WEU2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ccdc188F6WEU2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
Ccdc188F6WEU2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc188F6WEU2 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC24.44■■□□□ 1.5
Ccdc188F6WEU2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc188F6WEU2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ccdc188F6WEU2 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ccdc188F6WEU2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ccdc188F6WEU2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.43■■□□□ 1.5
Ccdc188F6WEU2 Gm43566-201ENSMUST00000196851 808 ntBASIC24.42■■□□□ 1.5
Ccdc188F6WEU2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
Ccdc188F6WEU2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.41■■□□□ 1.5
Ccdc188F6WEU2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc188F6WEU2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc188F6WEU2 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc188F6WEU2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
Ccdc188F6WEU2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ccdc188F6WEU2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.4■■□□□ 1.5
Ccdc188F6WEU2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.5
Ccdc188F6WEU2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
Ccdc188F6WEU2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc188F6WEU2 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.39■■□□□ 1.49
Ccdc188F6WEU2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Ccdc188F6WEU2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc188F6WEU2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ccdc188F6WEU2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ccdc188F6WEU2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC24.37■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms