Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shank1D3YZU1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.09■□□□□ 0.97
Shank1D3YZU1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shank1D3YZU1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Shank1D3YZU1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shank1D3YZU1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Shank1D3YZU1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shank1D3YZU1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.08■□□□□ 0.97
Shank1D3YZU1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Shank1D3YZU1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank1D3YZU1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Shank1D3YZU1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.07■□□□□ 0.96
Shank1D3YZU1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Shank1D3YZU1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.07■□□□□ 0.96
Shank1D3YZU1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank1D3YZU1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank1D3YZU1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Shank1D3YZU1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Shank1D3YZU1 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.05■□□□□ 0.96
Shank1D3YZU1 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.05■□□□□ 0.96
Shank1D3YZU1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.04■□□□□ 0.96
Shank1D3YZU1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.04■□□□□ 0.96
Shank1D3YZU1 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.04■□□□□ 0.96
Shank1D3YZU1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Shank1D3YZU1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shank1D3YZU1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Shank1D3YZU1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Shank1D3YZU1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shank1D3YZU1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shank1D3YZU1 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Shank1D3YZU1 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Shank1D3YZU1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Shank1D3YZU1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.02■□□□□ 0.95
Shank1D3YZU1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Shank1D3YZU1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shank1D3YZU1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shank1D3YZU1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21■□□□□ 0.95
Shank1D3YZU1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shank1D3YZU1 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shank1D3YZU1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21■□□□□ 0.95
Shank1D3YZU1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21■□□□□ 0.95
Shank1D3YZU1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21■□□□□ 0.95
Shank1D3YZU1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Shank1D3YZU1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Shank1D3YZU1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank1D3YZU1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shank1D3YZU1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shank1D3YZU1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shank1D3YZU1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shank1D3YZU1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shank1D3YZU1 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.98■□□□□ 0.95
Shank1D3YZU1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shank1D3YZU1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.97■□□□□ 0.95
Shank1D3YZU1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank1D3YZU1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.96■□□□□ 0.95
Shank1D3YZU1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.96■□□□□ 0.95
Shank1D3YZU1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shank1D3YZU1 Gm15546-201ENSMUST00000122095 826 ntBASIC20.96■□□□□ 0.95
Shank1D3YZU1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shank1D3YZU1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shank1D3YZU1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.95■□□□□ 0.94
Shank1D3YZU1 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shank1D3YZU1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank1D3YZU1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank1D3YZU1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank1D3YZU1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shank1D3YZU1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.93■□□□□ 0.94
Shank1D3YZU1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Shank1D3YZU1 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shank1D3YZU1 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Shank1D3YZU1 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shank1D3YZU1 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shank1D3YZU1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shank1D3YZU1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Shank1D3YZU1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.9■□□□□ 0.94
Shank1D3YZU1 Gm9812-201ENSMUST00000061934 968 ntBASIC20.9■□□□□ 0.94
Shank1D3YZU1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Shank1D3YZU1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Shank1D3YZU1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Shank1D3YZU1 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.9■□□□□ 0.94
Shank1D3YZU1 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.9■□□□□ 0.94
Shank1D3YZU1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Shank1D3YZU1 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.89■□□□□ 0.93
Shank1D3YZU1 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Shank1D3YZU1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.89■□□□□ 0.93
Shank1D3YZU1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank1D3YZU1 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Shank1D3YZU1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shank1D3YZU1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Shank1D3YZU1 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Shank1D3YZU1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Shank1D3YZU1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Shank1D3YZU1 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Shank1D3YZU1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Shank1D3YZU1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.86■□□□□ 0.93
Shank1D3YZU1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank1D3YZU1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Shank1D3YZU1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank1D3YZU1 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Shank1D3YZU1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms