Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav12-1A0N8R1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav12-1A0N8R1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav12-1A0N8R1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav12-1A0N8R1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav12-1A0N8R1 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav12-1A0N8R1 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav12-1A0N8R1 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav12-1A0N8R1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav12-1A0N8R1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav12-1A0N8R1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav12-1A0N8R1 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.41■□□□□ 0.7
Trav12-1A0N8R1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trav12-1A0N8R1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav12-1A0N8R1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav12-1A0N8R1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav12-1A0N8R1 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav12-1A0N8R1 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav12-1A0N8R1 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Trav12-1A0N8R1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav12-1A0N8R1 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.38■□□□□ 0.69
Trav12-1A0N8R1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav12-1A0N8R1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav12-1A0N8R1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12-1A0N8R1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12-1A0N8R1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12-1A0N8R1 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav12-1A0N8R1 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav12-1A0N8R1 Gm45855-201ENSMUST00000212546 880 ntBASIC19.36■□□□□ 0.69
Trav12-1A0N8R1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.36■□□□□ 0.69
Trav12-1A0N8R1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trav12-1A0N8R1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trav12-1A0N8R1 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav12-1A0N8R1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav12-1A0N8R1 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.35■□□□□ 0.69
Trav12-1A0N8R1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav12-1A0N8R1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12-1A0N8R1 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav12-1A0N8R1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
Trav12-1A0N8R1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav12-1A0N8R1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav12-1A0N8R1 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trav12-1A0N8R1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav12-1A0N8R1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.31■□□□□ 0.68
Trav12-1A0N8R1 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav12-1A0N8R1 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav12-1A0N8R1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trav12-1A0N8R1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav12-1A0N8R1 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav12-1A0N8R1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav12-1A0N8R1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav12-1A0N8R1 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav12-1A0N8R1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav12-1A0N8R1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trav12-1A0N8R1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav12-1A0N8R1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav12-1A0N8R1 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav12-1A0N8R1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav12-1A0N8R1 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav12-1A0N8R1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav12-1A0N8R1 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav12-1A0N8R1 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Trav12-1A0N8R1 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav12-1A0N8R1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Trav12-1A0N8R1 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav12-1A0N8R1 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav12-1A0N8R1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav12-1A0N8R1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trav12-1A0N8R1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav12-1A0N8R1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav12-1A0N8R1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12-1A0N8R1 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12-1A0N8R1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12-1A0N8R1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav12-1A0N8R1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trav12-1A0N8R1 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trav12-1A0N8R1 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav12-1A0N8R1 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.23■□□□□ 0.67
Trav12-1A0N8R1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav12-1A0N8R1 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.23■□□□□ 0.67
Trav12-1A0N8R1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav12-1A0N8R1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Trav12-1A0N8R1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12-1A0N8R1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12-1A0N8R1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12-1A0N8R1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav12-1A0N8R1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-1A0N8R1 Gm42699-201ENSMUST00000198104 1657 ntBASIC19.21■□□□□ 0.67
Trav12-1A0N8R1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-1A0N8R1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trav12-1A0N8R1 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-1A0N8R1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-1A0N8R1 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-1A0N8R1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav12-1A0N8R1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav12-1A0N8R1 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trav12-1A0N8R1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12-1A0N8R1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12-1A0N8R1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav12-1A0N8R1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 85.9 ms