Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Gm3854A0A1B0GSS6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Gm3854A0A1B0GSS6 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Gm3854A0A1B0GSS6 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.6■■□□□ 1.37
Gm3854A0A1B0GSS6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Gm3854A0A1B0GSS6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Gm3854A0A1B0GSS6 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
Gm3854A0A1B0GSS6 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Gm3854A0A1B0GSS6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm3854A0A1B0GSS6 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm3854A0A1B0GSS6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm3854A0A1B0GSS6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Gm3854A0A1B0GSS6 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Gm3854A0A1B0GSS6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
Gm3854A0A1B0GSS6 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
Gm3854A0A1B0GSS6 Gm7332-201ENSMUST00000118351 454 ntBASIC23.58■■□□□ 1.37
Gm3854A0A1B0GSS6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Gm3854A0A1B0GSS6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.58■■□□□ 1.37
Gm3854A0A1B0GSS6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Gm3854A0A1B0GSS6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Gm3854A0A1B0GSS6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Gm3854A0A1B0GSS6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.57■■□□□ 1.36
Gm3854A0A1B0GSS6 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Gm3854A0A1B0GSS6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Gm3854A0A1B0GSS6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
Gm3854A0A1B0GSS6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Gm3854A0A1B0GSS6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Gm3854A0A1B0GSS6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.55■■□□□ 1.36
Gm3854A0A1B0GSS6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.55■■□□□ 1.36
Gm3854A0A1B0GSS6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Gm3854A0A1B0GSS6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Gm3854A0A1B0GSS6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Gm3854A0A1B0GSS6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Gm3854A0A1B0GSS6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.53■■□□□ 1.36
Gm3854A0A1B0GSS6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
Gm3854A0A1B0GSS6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Gm3854A0A1B0GSS6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Gm3854A0A1B0GSS6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.52■■□□□ 1.36
Gm3854A0A1B0GSS6 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.51■■□□□ 1.35
Gm3854A0A1B0GSS6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
Gm3854A0A1B0GSS6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Gm3854A0A1B0GSS6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Gm3854A0A1B0GSS6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Gm3854A0A1B0GSS6 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.51■■□□□ 1.35
Gm3854A0A1B0GSS6 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm3854A0A1B0GSS6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm3854A0A1B0GSS6 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Gm3854A0A1B0GSS6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm3854A0A1B0GSS6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Gm3854A0A1B0GSS6 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
Gm3854A0A1B0GSS6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.48■■□□□ 1.35
Gm3854A0A1B0GSS6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Gm3854A0A1B0GSS6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.48■■□□□ 1.35
Gm3854A0A1B0GSS6 Gm9812-201ENSMUST00000061934 968 ntBASIC23.47■■□□□ 1.35
Gm3854A0A1B0GSS6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm3854A0A1B0GSS6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm3854A0A1B0GSS6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.46■■□□□ 1.35
Gm3854A0A1B0GSS6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Gm3854A0A1B0GSS6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Gm3854A0A1B0GSS6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm3854A0A1B0GSS6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm3854A0A1B0GSS6 Gm14523-201ENSMUST00000117260 558 ntBASIC23.45■■□□□ 1.34
Gm3854A0A1B0GSS6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm3854A0A1B0GSS6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Gm3854A0A1B0GSS6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.44■■□□□ 1.34
Gm3854A0A1B0GSS6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
Gm3854A0A1B0GSS6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Gm3854A0A1B0GSS6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Gm3854A0A1B0GSS6 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.44■■□□□ 1.34
Gm3854A0A1B0GSS6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.43■■□□□ 1.34
Gm3854A0A1B0GSS6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Gm3854A0A1B0GSS6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Gm3854A0A1B0GSS6 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Gm3854A0A1B0GSS6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm3854A0A1B0GSS6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm3854A0A1B0GSS6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm3854A0A1B0GSS6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Gm3854A0A1B0GSS6 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Gm3854A0A1B0GSS6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Gm3854A0A1B0GSS6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Gm3854A0A1B0GSS6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Gm3854A0A1B0GSS6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm3854A0A1B0GSS6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Gm3854A0A1B0GSS6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Gm3854A0A1B0GSS6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Gm3854A0A1B0GSS6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm3854A0A1B0GSS6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.38■■□□□ 1.33
Gm3854A0A1B0GSS6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Gm3854A0A1B0GSS6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.37■■□□□ 1.33
Gm3854A0A1B0GSS6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm3854A0A1B0GSS6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
Gm3854A0A1B0GSS6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm3854A0A1B0GSS6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm3854A0A1B0GSS6 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
Gm3854A0A1B0GSS6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm3854A0A1B0GSS6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.35■■□□□ 1.33
Gm3854A0A1B0GSS6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Gm3854A0A1B0GSS6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.33■■□□□ 1.33
Gm3854A0A1B0GSS6 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.33■■□□□ 1.33
Gm3854A0A1B0GSS6 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms