Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv1-88A0A140T8N1 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv1-88A0A140T8N1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Igkv1-88A0A140T8N1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv1-88A0A140T8N1 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Igkv1-88A0A140T8N1 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv1-88A0A140T8N1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv1-88A0A140T8N1 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Igkv1-88A0A140T8N1 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Igkv1-88A0A140T8N1 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Igkv1-88A0A140T8N1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv1-88A0A140T8N1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Igkv1-88A0A140T8N1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv1-88A0A140T8N1 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv1-88A0A140T8N1 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Igkv1-88A0A140T8N1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv1-88A0A140T8N1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv1-88A0A140T8N1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv1-88A0A140T8N1 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Igkv1-88A0A140T8N1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv1-88A0A140T8N1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Igkv1-88A0A140T8N1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Igkv1-88A0A140T8N1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Igkv1-88A0A140T8N1 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv1-88A0A140T8N1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Igkv1-88A0A140T8N1 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Igkv1-88A0A140T8N1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv1-88A0A140T8N1 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Igkv1-88A0A140T8N1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv1-88A0A140T8N1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv1-88A0A140T8N1 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Igkv1-88A0A140T8N1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv1-88A0A140T8N1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv1-88A0A140T8N1 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Igkv1-88A0A140T8N1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv1-88A0A140T8N1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv1-88A0A140T8N1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Igkv1-88A0A140T8N1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv1-88A0A140T8N1 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Igkv1-88A0A140T8N1 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Igkv1-88A0A140T8N1 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Igkv1-88A0A140T8N1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv1-88A0A140T8N1 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Igkv1-88A0A140T8N1 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv1-88A0A140T8N1 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.15■□□□□ 0.02
Igkv1-88A0A140T8N1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv1-88A0A140T8N1 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv1-88A0A140T8N1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Igkv1-88A0A140T8N1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv1-88A0A140T8N1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv1-88A0A140T8N1 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Igkv1-88A0A140T8N1 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv1-88A0A140T8N1 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv1-88A0A140T8N1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv1-88A0A140T8N1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv1-88A0A140T8N1 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Igkv1-88A0A140T8N1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.13■□□□□ 0.01
Igkv1-88A0A140T8N1 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv1-88A0A140T8N1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv1-88A0A140T8N1 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.13■□□□□ 0.01
Igkv1-88A0A140T8N1 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Igkv1-88A0A140T8N1 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv1-88A0A140T8N1 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Igkv1-88A0A140T8N1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv1-88A0A140T8N1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv1-88A0A140T8N1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv1-88A0A140T8N1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv1-88A0A140T8N1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.12■□□□□ 0.01
Igkv1-88A0A140T8N1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Igkv1-88A0A140T8N1 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Igkv1-88A0A140T8N1 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.1■□□□□ 0.01
Igkv1-88A0A140T8N1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Igkv1-88A0A140T8N1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.1■□□□□ 0.01
Igkv1-88A0A140T8N1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Igkv1-88A0A140T8N1 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Igkv1-88A0A140T8N1 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igkv1-88A0A140T8N1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Igkv1-88A0A140T8N1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Igkv1-88A0A140T8N1 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv1-88A0A140T8N1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv1-88A0A140T8N1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv1-88A0A140T8N1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv1-88A0A140T8N1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Igkv1-88A0A140T8N1 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.08■□□□□ 0
Igkv1-88A0A140T8N1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv1-88A0A140T8N1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC15.08■□□□□ 0
Igkv1-88A0A140T8N1 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Igkv1-88A0A140T8N1 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.08■□□□□ 0
Igkv1-88A0A140T8N1 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv1-88A0A140T8N1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Igkv1-88A0A140T8N1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Igkv1-88A0A140T8N1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms