Protein–RNA interactions for Protein: A0A140T8M7

Rpl23a-ps3, Ribosomal protein L23A, pseudogene 3, mousemouse

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl23a-ps3A0A140T8M7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.28■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.27■□□□□ 0.68
Rpl23a-ps3A0A140T8M7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.26■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.21■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rpl23a-ps3A0A140T8M7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.17■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rpl23a-ps3A0A140T8M7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.14■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.12■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rpl23a-ps3A0A140T8M7 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms