Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.33■□□□□ 0.85
Trav15d-2-dv6d-2A0A0G2JGQ7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.31■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.31■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.29■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.28■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Trav15d-2-dv6d-2A0A0G2JGQ7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.21■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkain2-201ENSMUST00000092602 558 ntBASIC20.21■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.21■□□□□ 0.83
Trav15d-2-dv6d-2A0A0G2JGQ7 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.2■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trav15d-2-dv6d-2A0A0G2JGQ7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms