Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4n-4A0A075B615 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4n-4A0A075B615 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4n-4A0A075B615 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4n-4A0A075B615 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4n-4A0A075B615 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav4n-4A0A075B615 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trav4n-4A0A075B615 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4n-4A0A075B615 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4n-4A0A075B615 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav4n-4A0A075B615 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4n-4A0A075B615 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav4n-4A0A075B615 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4n-4A0A075B615 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4n-4A0A075B615 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav4n-4A0A075B615 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav4n-4A0A075B615 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav4n-4A0A075B615 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4n-4A0A075B615 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4n-4A0A075B615 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav4n-4A0A075B615 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Trav4n-4A0A075B615 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav4n-4A0A075B615 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4n-4A0A075B615 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4n-4A0A075B615 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4n-4A0A075B615 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav4n-4A0A075B615 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4n-4A0A075B615 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Trav4n-4A0A075B615 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4n-4A0A075B615 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav4n-4A0A075B615 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trav4n-4A0A075B615 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4n-4A0A075B615 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4n-4A0A075B615 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4n-4A0A075B615 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav4n-4A0A075B615 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4n-4A0A075B615 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Trav4n-4A0A075B615 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav4n-4A0A075B615 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav4n-4A0A075B615 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav4n-4A0A075B615 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Trav4n-4A0A075B615 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4n-4A0A075B615 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4n-4A0A075B615 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4n-4A0A075B615 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4n-4A0A075B615 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4n-4A0A075B615 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4n-4A0A075B615 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav4n-4A0A075B615 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4n-4A0A075B615 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4n-4A0A075B615 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4n-4A0A075B615 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4n-4A0A075B615 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav4n-4A0A075B615 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4n-4A0A075B615 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4n-4A0A075B615 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4n-4A0A075B615 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav4n-4A0A075B615 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav4n-4A0A075B615 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Trav4n-4A0A075B615 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav4n-4A0A075B615 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4n-4A0A075B615 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav4n-4A0A075B615 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC16.07■□□□□ 0.16
Trav4n-4A0A075B615 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Trav4n-4A0A075B615 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4n-4A0A075B615 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav4n-4A0A075B615 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav4n-4A0A075B615 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4n-4A0A075B615 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Trav4n-4A0A075B615 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav4n-4A0A075B615 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4n-4A0A075B615 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4n-4A0A075B615 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav4n-4A0A075B615 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav4n-4A0A075B615 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trav4n-4A0A075B615 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav4n-4A0A075B615 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4n-4A0A075B615 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4n-4A0A075B615 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4n-4A0A075B615 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav4n-4A0A075B615 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4n-4A0A075B615 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4n-4A0A075B615 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav4n-4A0A075B615 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4n-4A0A075B615 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4n-4A0A075B615 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4n-4A0A075B615 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav4n-4A0A075B615 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav4n-4A0A075B615 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav4n-4A0A075B615 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC16.03■□□□□ 0.16
Trav4n-4A0A075B615 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms