Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AP003122.4-201ENST00000530980 758 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC011611.1-201ENST00000552179 197 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 NCAPGP2-201ENST00000557911 754 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC009977.1-201ENST00000586015 570 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AL669831.4-202ENST00000590817 238 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC006557.5-201ENST00000603126 811 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AL355812.1-201ENST00000603215 216 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 SRGNP1-201ENST00000603392 451 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC131902.3-201ENST00000611767 581 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AL596245.1-201ENST00000618994 362 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 AC092326.2-201ENST00000624772 1561 ntBASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.67□□□□□ -1.82
SNX9Q9Y5X1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AL049781.1-201ENST00000623195 3585 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC092447.10-201ENST00000620607 1652 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 RNU6-28P-201ENST00000362378 107 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 MIR34B-201ENST00000385076 84 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 RPS20P2-201ENST00000402520 389 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AL136116.1-201ENST00000403591 381 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 RNA5SP44-201ENST00000410446 133 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 MTATP6P27-201ENST00000416987 621 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 USP9YP13-201ENST00000417797 480 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 OR1AA1P-201ENST00000419597 916 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 RPS15AP6-201ENST00000420703 385 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 RPL31P12-201ENST00000422587 358 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC244505.5-201ENST00000443639 207 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 FAM103A2P-201ENST00000444122 354 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 RPS24P6-201ENST00000452670 400 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC007967.1-201ENST00000455422 1159 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 SNRPFP4-201ENST00000456366 242 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 RPL9P33-201ENST00000484311 566 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 HMGB1P22-201ENST00000505315 124 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC074250.1-201ENST00000511117 192 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AP003392.2-201ENST00000527269 208 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 SYF2P1-201ENST00000550658 413 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 ZNF519P3-201ENST00000557158 1032 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC011468.4-201ENST00000603942 409 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC107304.1-201ENST00000604229 296 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC011816.2-201ENST00000607089 556 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC098614.4-201ENST00000607601 462 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC091965.4-201ENST00000607691 587 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC099778.2-201ENST00000610904 211 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 AC008498.1-201ENST00000613012 531 ntBASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.66□□□□□ -1.82
SNX9Q9Y5X1 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.65□□□□□ -1.82
SNX9Q9Y5X1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
SNX9Q9Y5X1 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
SNX9Q9Y5X1 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.65□□□□□ -1.82
SNX9Q9Y5X1 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AC005832.2-201ENST00000538921 1430 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 RNA5SP197-201ENST00000363357 119 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 SNORD46.1-201ENST00000364139 104 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 RNU6-517P-201ENST00000384362 110 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 RNVU1-14-201ENST00000384770 164 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 RN7SKP111-201ENST00000410349 271 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 UBE2V1P10-201ENST00000414685 269 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 ELOCP17-201ENST00000414751 326 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 MTND1P4-201ENST00000435196 415 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AC005019.1-201ENST00000436455 431 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 SDCBPP1-201ENST00000440192 890 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 RPL7P52-201ENST00000449200 742 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AL353691.1-201ENST00000451332 387 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 Z82190.1-201ENST00000454534 490 ntBASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.65□□□□□ -1.83
SNX9Q9Y5X1 FCF1P3-201ENST00000496394 590 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms