Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 SNRPEP9-201ENST00000436794 238 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC064862.5-201ENST00000440618 334 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 MTND4LP16-201ENST00000440828 295 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AL356121.1-201ENST00000442911 156 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 RPL21P93-201ENST00000480465 489 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 SNRPCP11-201ENST00000492453 205 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC026979.1-201ENST00000492525 396 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 RNA5SP165-201ENST00000517142 115 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 NRBF2P4-201ENST00000520874 850 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC107953.1-201ENST00000522216 297 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC107016.1-201ENST00000550463 337 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 HMGB1P14-201ENST00000557424 591 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC037471.2-201ENST00000564941 598 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AC091135.1-201ENST00000585943 307 ntBASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
GTF3C3Q9Y5Q9 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 Y_RNA.414-201ENST00000384011 101 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 RNU6-1025P-201ENST00000410629 104 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 RPS20P14-201ENST00000412545 360 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 BX323014.1-201ENST00000412876 237 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 ACTR3BP6-201ENST00000422332 1241 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC009963.3-201ENST00000458090 486 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 RNA5SP310-201ENST00000459084 116 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 DYNLL1P5-201ENST00000467158 270 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC090115.3-201ENST00000553218 849 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC091178.1-203ENST00000584586 279 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC010201.1-201ENST00000605051 540 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC004805.2-201ENST00000605382 482 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 HMGB1P50-201ENST00000605814 607 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 uc_338.5-201ENST00000611839 155 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC023043.4-201ENST00000612081 449 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AL121612.2-201ENST00000612261 482 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC007546.1-201ENST00000619452 559 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 AC019206.1-201ENST00000621938 425 ntBASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
GTF3C3Q9Y5Q9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 RNU6-797P-201ENST00000363101 109 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 Y_RNA.263-201ENST00000364659 114 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 RNU1-44P-201ENST00000384453 163 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 MIR600-201ENST00000385007 98 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 RPL32P23-201ENST00000397237 405 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 RPS4XP7-201ENST00000406274 780 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AC073063.1-201ENST00000434352 607 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 HSFY6P-201ENST00000445573 403 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AL445665.1-202ENST00000452436 324 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AL360157.1-201ENST00000565962 87 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AC005498.1-201ENST00000592125 465 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AC020914.4-201ENST00000597690 277 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AP001437.1-201ENST00000608783 456 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AC104985.2-201ENST00000620598 500 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AC019278.1-201ENST00000623516 479 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 CR381572.2-201ENST00000624852 397 ntBASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
GTF3C3Q9Y5Q9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 MIR412-201ENST00000362142 91 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 RNU6-1179P-201ENST00000384667 107 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 RPLP0P7-201ENST00000416050 667 ntBASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
GTF3C3Q9Y5Q9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms