Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
AP4E1Q9UPM8 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 IRF5P1-201ENST00000504852 2164 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC107027.3-201ENST00000565095 3473 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.552-201ENST00000384665 112 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 SNORA41-201ENST00000384675 132 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 U3.35-201ENST00000408405 208 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 RNU4-65P-201ENST00000410473 140 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 RPS17P8-201ENST00000434525 335 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 RPL21P2-201ENST00000440049 481 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AL162389.1-201ENST00000449233 177 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC239809.1-201ENST00000450470 217 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AL353752.1-201ENST00000454946 260 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC092324.1-201ENST00000468671 324 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 CYCSP27-201ENST00000527643 293 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC021006.3-201ENST00000530771 192 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC026371.1-201ENST00000551867 419 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 MIR3936-201ENST00000584304 110 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC007566.2-201ENST00000603642 413 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC013244.1-201ENST00000604279 193 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AL121932.1-201ENST00000605542 214 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC116447.1-201ENST00000613153 453 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 TUG1_2.1-201ENST00000614234 87 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AL359547.2-201ENST00000615810 418 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 MIR7155-201ENST00000615925 56 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 PHKBP1-201ENST00000450951 1951 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 SMG1P6-201ENST00000532337 2930 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 HSPA8P4-201ENST00000511877 1920 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 AC007529.1-201ENST00000418574 2178 ntBASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
AP4E1Q9UPM8 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5□□□□□ -1.61
AP4E1Q9UPM8 SAMMSON-226ENST00000642089 1582 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
AP4E1Q9UPM8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC009229.4-201ENST00000623854 1947 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5□□□□□ -1.61
AP4E1Q9UPM8 TLK1P1-201ENST00000456760 2440 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.39-201ENST00000362620 98 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 Y_RNA.210-201ENST00000364161 110 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 SNORA23-201ENST00000365128 182 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 RNU6-842P-201ENST00000384269 107 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 U3.30-201ENST00000391308 210 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 RPL21P1-201ENST00000399532 476 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 RPS12P5-201ENST00000423449 371 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC099799.1-201ENST00000439809 192 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 OR1H1P-201ENST00000448731 937 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 FABP5P13-201ENST00000452144 328 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 RN7SL591P-201ENST00000496150 292 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC096745.1-201ENST00000509945 370 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 RNU6-307P-201ENST00000516743 106 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 IL7-206ENST00000520269 456 ntTSL 3 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC093249.4-201ENST00000564755 259 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC006329.2-201ENST00000611491 394 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC243312.2-201ENST00000623340 601 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 AC138627.2-201ENST00000624202 601 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 MTND5P7-201ENST00000413558 1798 ntBASIC5□□□□□ -1.61
AP4E1Q9UPM8 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
AP4E1Q9UPM8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5□□□□□ -1.61
AP4E1Q9UPM8 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 156.4 ms