Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC039056.2-201ENST00000622261 511 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 LRRC77P-213ENST00000637727 880 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 CR848007.1-201ENST00000442354 1699 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 AC032011.1-201ENST00000611703 1549 ntBASIC3.89□□□□□ -1.79
VPS4AQ9UN37 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
VPS4AQ9UN37 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 RNU6-511P-201ENST00000363496 107 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 RNY3P13-201ENST00000365542 102 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 Y_RNA.402-201ENST00000383972 102 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 RNU6-712P-201ENST00000410558 100 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 RNU2-62P-201ENST00000410868 191 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC099677.1-201ENST00000420575 175 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AL159169.1-201ENST00000421119 127 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC137499.1-201ENST00000427602 88 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC017083.1-201ENST00000428093 483 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AL445584.1-201ENST00000431451 330 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 MTND4P18-201ENST00000447010 465 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC007967.1-201ENST00000455422 1159 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC026726.1-201ENST00000512859 601 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC099522.1-202ENST00000514718 367 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 RNU7-143P-201ENST00000516781 65 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 GNRHR2P1-201ENST00000555315 631 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC006504.3-201ENST00000586818 523 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC105224.1-201ENST00000587055 421 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 SNORA51-201ENST00000606420 132 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AL158211.4-201ENST00000606988 584 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC012314.7-201ENST00000619693 93 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC009161.2-201ENST00000624626 138 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 AC005609.4-201ENST00000625071 447 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 MIR1321-201ENST00000637766 79 ntBASIC3.88□□□□□ -1.79
VPS4AQ9UN37 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
VPS4AQ9UN37 MAPK10-373ENST00000641983 6772 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 OR1S2-201ENST00000302592 978 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 SNORD35B-201ENST00000363660 87 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 MIR135A2-201ENST00000384854 100 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 Y_RNA.604-201ENST00000410574 102 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC091390.3-201ENST00000426478 338 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC087650.1-201ENST00000431445 468 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 ANP32BP2-201ENST00000454525 545 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 RNA5SP246-201ENST00000458909 119 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC078817.1-201ENST00000492623 435 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 RPL31P61-201ENST00000496160 376 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC135721.1-201ENST00000497954 479 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 TRMT10BP1-201ENST00000519377 943 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 SUB1P2-201ENST00000556401 297 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AL359212.1-201ENST00000556608 614 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AL031176.1-201ENST00000604554 466 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AL136363.1-201ENST00000605349 337 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC019176.2-201ENST00000611579 315 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AL161912.2-201ENST00000565707 3007 ntBASIC3.87□□□□□ -1.79
VPS4AQ9UN37 AC116667.1-201ENST00000604855 2072 ntBASIC3.86□□□□□ -1.79
VPS4AQ9UN37 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS4AQ9UN37 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms