Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 MTND1P5-201ENST00000517906 940 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 SUMO2P20-201ENST00000520803 283 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AP003497.1-201ENST00000528472 562 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 OR4P1P-201ENST00000530808 1136 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC245505.1-201ENST00000556398 224 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC104984.5-201ENST00000586878 94 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 RMST_9.1-201ENST00000619945 193 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC006386.2-201ENST00000624491 75 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AC012005.1-201ENST00000624575 75 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 MTND5P33-201ENST00000571250 1450 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HDAC9Q9UKV0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 RNU6-1042P-201ENST00000384204 107 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 RNU6-301P-201ENST00000384277 107 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 Y_RNA.582-201ENST00000391023 95 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 HLFP1-201ENST00000402375 499 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AL359704.1-201ENST00000411586 781 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 HMGB3P23-201ENST00000414981 585 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 ATP5JP1-201ENST00000431631 322 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC104308.1-201ENST00000454621 333 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 RPS3AP14-201ENST00000483907 780 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 NDUFB4P2-201ENST00000509515 391 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 RNU2-27P-201ENST00000516185 142 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 SNORA70.18-201ENST00000516696 98 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 RNU6-201P-201ENST00000517100 61 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 IGKV2D-23-201ENST00000518179 286 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 EIF4BP1-201ENST00000554881 351 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AL157394.1-201ENST00000562983 1224 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 HMGN1P30-201ENST00000589286 268 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AP003465.2-201ENST00000602571 373 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AL359999.1-201ENST00000604513 294 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC006077.1-201ENST00000604746 343 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 YPEL5P2-201ENST00000605553 359 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC107294.1-201ENST00000609524 467 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC091834.1-201ENST00000614543 472 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AP001148.1-201ENST00000624124 2359 ntBASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
HDAC9Q9UKV0 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 RNU6-259P-201ENST00000383999 107 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 ELOCP17-201ENST00000414751 326 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 MTCO3P30-201ENST00000426425 670 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AC009961.2-201ENST00000435771 251 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 RPL22P17-201ENST00000438729 315 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 SRRM1P2-201ENST00000464531 1192 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AC021382.1-201ENST00000483523 359 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AC034268.2-201ENST00000571784 482 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AC091304.9-201ENST00000612091 226 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AL353743.1-202ENST00000431724 1695 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 AC092125.1-201ENST00000562568 1995 ntBASIC4.34□□□□□ -1.71
HDAC9Q9UKV0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
HDAC9Q9UKV0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HDAC9Q9UKV0 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.34□□□□□ -1.72
HDAC9Q9UKV0 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
HDAC9Q9UKV0 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC9Q9UKV0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC9Q9UKV0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC9Q9UKV0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HDAC9Q9UKV0 AL672296.1-201ENST00000427780 2158 ntBASIC4.33□□□□□ -1.72
HDAC9Q9UKV0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms