Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AC091925.1-201ENST00000623204 462 ntBASIC4.08□□□□□ -1.76
PACSIN3Q9UKS6 AC015908.5-201ENST00000623289 343 ntBASIC4.08□□□□□ -1.76
PACSIN3Q9UKS6 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
PACSIN3Q9UKS6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PACSIN3Q9UKS6 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PACSIN3Q9UKS6 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 RAD17P1-201ENST00000418130 2042 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC126755.2-208ENST00000327792 462 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC138969.1-213ENST00000331436 462 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 RNU1-130P-201ENST00000363930 160 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 Y_RNA.197-201ENST00000364004 102 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AL023807.1-201ENST00000407932 359 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 BX323014.1-201ENST00000412876 237 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC005517.2-201ENST00000424673 553 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC091390.1-201ENST00000433904 331 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 RPS20P5-201ENST00000434808 360 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC114495.1-201ENST00000441274 436 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AP000893.1-201ENST00000474462 794 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC068587.1-201ENST00000483613 781 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC026979.1-201ENST00000492525 396 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC104164.2-201ENST00000496953 495 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC020893.1-201ENST00000502452 580 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC018797.3-201ENST00000513388 1241 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 SNORD27.1-201ENST00000516319 72 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 Y_RNA.682-201ENST00000516457 100 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-1038P-201ENST00000516516 104 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-273P-201ENST00000516937 96 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 APOOP3-201ENST00000536787 586 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC128657.1-201ENST00000549459 145 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 MIR3942-201ENST00000585264 109 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 DPPA3P3-201ENST00000603842 430 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC083809.1-201ENST00000615051 472 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 LINC00901.1-201ENST00000617252 152 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 uc_338.22-201ENST00000622722 187 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC244517.12-201ENST00000623581 663 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AC026951.1-201ENST00000559530 2459 ntBASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.07□□□□□ -1.76
PACSIN3Q9UKS6 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 MTND4P1-201ENST00000457501 1466 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 Y_RNA.22-201ENST00000362492 102 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-522P-201ENST00000364497 107 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 SNORA70.2-201ENST00000364506 135 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-1207P-201ENST00000384343 107 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RNU6-505P-201ENST00000384427 107 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 U3.22-201ENST00000391120 215 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AL359634.1-202ENST00000404721 284 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 SNORA3C-201ENST00000408792 125 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RN7SKP235-201ENST00000410662 305 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AL590233.1-201ENST00000430017 456 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RPL21P133-201ENST00000443666 476 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 PRPS1P1-201ENST00000445305 876 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 NANOGP10-201ENST00000453325 895 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RPS29P15-201ENST00000458329 171 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RNU7-152P-201ENST00000458982 64 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 Y_RNA.635-201ENST00000459041 101 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 RPL7L1P8-201ENST00000469911 741 ntBASIC4.06□□□□□ -1.76
PACSIN3Q9UKS6 AL136126.1-201ENST00000473603 402 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms