Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.59□□□□□ -1.83
HCN3Q9P1Z3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HCN3Q9P1Z3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HCN3Q9P1Z3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HCN3Q9P1Z3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
HCN3Q9P1Z3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.59□□□□□ -1.84
HCN3Q9P1Z3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AL353746.1-201ENST00000566293 6881 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 SNORA20.2-201ENST00000383922 131 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 MIR514A1-201ENST00000385133 98 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 RPL7P60-201ENST00000397636 735 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 MTCO3P41-201ENST00000414801 328 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 USP9YP14-201ENST00000430663 563 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 SNORA71B-202ENST00000439232 272 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 NANOGP10-201ENST00000453325 895 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 HMGN2P7-201ENST00000456186 273 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 TPT1P7-201ENST00000458300 517 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 SNRPGP3-201ENST00000469405 227 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 BTF3L4P4-201ENST00000506381 449 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 CDC42P4-201ENST00000510507 563 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 SAP18P1-201ENST00000512058 390 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 RNU1-61P-201ENST00000516107 151 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 Vault.3-201ENST00000516676 95 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC128657.1-201ENST00000549459 145 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AP005205.1-201ENST00000563503 508 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 MIR4429-201ENST00000580105 73 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 NRBF2P1-201ENST00000587407 859 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC073648.5-201ENST00000603502 305 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC245389.1-201ENST00000605141 529 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 MIR98-201ENST00000606724 119 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC109347.2-201ENST00000610220 349 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC079684.1-201ENST00000621405 437 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC110801.1-201ENST00000623590 212 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC244205.2-202ENST00000635781 342 ntBASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HCN3Q9P1Z3 RNA5SP124-201ENST00000362739 110 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 RNU4-1-201ENST00000363925 141 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 U3.11-201ENST00000364476 212 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 U8.11-201ENST00000384699 133 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 U8.12-201ENST00000384701 133 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 MIR1290-201ENST00000408735 78 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 RN7SKP140-201ENST00000411196 284 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC006946.1-201ENST00000429106 328 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 RPL31P35-201ENST00000431058 377 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 NOTCH2P1-201ENST00000443481 624 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC016696.1-201ENST00000446949 318 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC140076.1-201ENST00000449897 361 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 MTCO3P20-201ENST00000454926 688 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 U8.18-201ENST00000459285 133 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 RPS20P20-201ENST00000460498 340 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 RN7SL93P-201ENST00000463035 293 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC084198.1-201ENST00000477747 402 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 Y_RNA.655-201ENST00000515919 96 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 RNU6-405P-201ENST00000516637 110 ntBASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN3Q9P1Z3 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms