Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 DNAJC19P3-201ENST00000594491 331 ntBASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 TUG1_1.1-201ENST00000610654 145 ntBASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 AC004852.3-201ENST00000614131 326 ntBASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 AC006213.4-201ENST00000616184 634 ntBASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 AC005336.3-201ENST00000623833 2679 ntBASIC2.1□□□□□ -2.07
UBQLN4Q9NRR5 AL022578.1-201ENST00000439330 1433 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 RNU6-839P-201ENST00000363347 108 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 ATP5F1P1-201ENST00000433775 569 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 HIGD1AP2-201ENST00000446367 280 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 MTND2P30-201ENST00000456663 382 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 RPL31P41-201ENST00000477967 372 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 HSPE1P6-201ENST00000479457 291 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 COX7A2P2-201ENST00000505291 250 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 AC091860.1-201ENST00000505723 432 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 MRPS36P2-201ENST00000512569 299 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 SNORA48.10-201ENST00000516965 160 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 MTCYBP20-201ENST00000524239 1129 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 SETP7-201ENST00000552169 453 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 MIR4789-201ENST00000577469 82 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 MIR6852-201ENST00000621699 66 ntBASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.09□□□□□ -2.07
UBQLN4Q9NRR5 ZNF849P-201ENST00000594711 1566 ntBASIC2.09□□□□□ -2.08
UBQLN4Q9NRR5 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.09□□□□□ -2.08
UBQLN4Q9NRR5 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
UBQLN4Q9NRR5 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
UBQLN4Q9NRR5 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
UBQLN4Q9NRR5 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 Z99496.1-201ENST00000469424 1477 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 RNA5SP289-201ENST00000362332 137 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 RNU5A-1-201ENST00000362698 116 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 RNU6-270P-201ENST00000364131 105 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AP002784.2-201ENST00000397300 549 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC007064.1-201ENST00000412238 351 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC092634.6-201ENST00000418558 192 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 BEND7P1-201ENST00000422058 457 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 RAC1P8-201ENST00000427086 527 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC018634.1-201ENST00000437554 401 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 DDX3P2-201ENST00000446138 111 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 MTND2P3-201ENST00000452458 470 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC092757.1-201ENST00000467293 467 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 RBM43P1-201ENST00000476891 1081 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC112518.2-201ENST00000508565 425 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 RNA5SP281-201ENST00000516504 135 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC087808.1-201ENST00000520501 361 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AP002770.2-201ENST00000543613 532 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 LINC00557-201ENST00000563184 1279 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AL355877.2-201ENST00000603670 358 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 VN1R74P-201ENST00000613259 503 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC080188.3-201ENST00000624842 748 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 AC008669.1-201ENST00000565823 2178 ntBASIC2.08□□□□□ -2.08
UBQLN4Q9NRR5 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.07□□□□□ -2.08
UBQLN4Q9NRR5 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.07□□□□□ -2.08
UBQLN4Q9NRR5 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
UBQLN4Q9NRR5 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
UBQLN4Q9NRR5 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.07□□□□□ -2.08
UBQLN4Q9NRR5 MIR1290-201ENST00000408735 78 ntBASIC2.07□□□□□ -2.08
UBQLN4Q9NRR5 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms