Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2□□□□□ -2.09
VCX3BQ9H321 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2□□□□□ -2.09
VCX3BQ9H321 AL136380.1-201ENST00000447970 162 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 RN7SL542P-201ENST00000467147 294 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2□□□□□ -2.09
VCX3BQ9H321 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2□□□□□ -2.09
VCX3BQ9H321 RNA5SP341-201ENST00000516261 117 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AC010186.2-204ENST00000537668 439 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2□□□□□ -2.09
VCX3BQ9H321 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2□□□□□ -2.09
VCX3BQ9H321 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2□□□□□ -2.09
VCX3BQ9H321 MTCYBP27-201ENST00000555160 670 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2□□□□□ -2.09
VCX3BQ9H321 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2□□□□□ -2.09
VCX3BQ9H321 MIR4529-201ENST00000578110 78 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AC090897.2-201ENST00000581715 130 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AL020997.2-201ENST00000602607 184 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AC005034.5-201ENST00000604219 466 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 AL355297.2-201ENST00000604792 129 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 MIR378J-201ENST00000611988 109 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VCX3BQ9H321 AC073569.3-201ENST00000619055 682 ntBASIC2□□□□□ -2.09
VCX3BQ9H321 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC2□□□□□ -2.09
VCX3BQ9H321 AC008555.8-201ENST00000623602 2168 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 FTLP6-201ENST00000355274 422 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VCX3BQ9H321 MIR649-201ENST00000384843 97 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 SNORD56-201ENST00000413522 71 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC018634.1-201ENST00000437554 401 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC105272.1-201ENST00000438604 198 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC016691.1-201ENST00000441321 413 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AL591719.1-201ENST00000444669 744 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AL592447.1-201ENST00000447592 540 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC009220.1-201ENST00000451614 275 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 MTND3P4-201ENST00000453537 303 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VCX3BQ9H321 ATG12P2-201ENST00000456830 416 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC234781.5-201ENST00000508429 271 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC022784.5-201ENST00000522241 437 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 IGJP1-201ENST00000522682 475 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC013444.2-201ENST00000603317 787 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 BNIP3P4-201ENST00000604946 565 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC093732.2-201ENST00000607950 274 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 MIR1264-201ENST00000616374 69 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.99□□□□□ -2.09
VCX3BQ9H321 AC130650.2-201ENST00000618736 2403 ntBASIC1.99□□□□□ -2.09
VCX3BQ9H321 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VCX3BQ9H321 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 SNORA56-201ENST00000383966 129 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 MIR141-201ENST00000384975 95 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 RNU6-882P-201ENST00000391025 103 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 MIR937-201ENST00000401271 86 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 RNU6-77P-201ENST00000410554 91 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 RNA5SP489-201ENST00000410986 109 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC009237.2-201ENST00000421358 284 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 CR848007.2-201ENST00000424918 787 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 ARL5AP4-201ENST00000430731 512 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AL050321.1-201ENST00000432363 400 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 CDC42P1-201ENST00000456658 548 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 RPL23AP41-201ENST00000484754 458 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC020699.1-201ENST00000505161 445 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VCX3BQ9H321 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC022447.1-201ENST00000515358 464 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC007621.1-201ENST00000604544 437 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC096586.1-201ENST00000610267 561 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AL590099.1-201ENST00000615276 138 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC104307.1-201ENST00000616142 196 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AL163051.2-201ENST00000618976 735 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.98□□□□□ -2.09
VCX3BQ9H321 AC244517.12-201ENST00000623581 663 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
VCX3BQ9H321 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms