Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC044913.1-201ENST00000557200 430 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC025918.2-201ENST00000558683 763 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 MIR5002-201ENST00000584713 97 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC012669.1-201ENST00000603209 283 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AP001033.2-201ENST00000609701 1003 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 AC098679.5-201ENST00000624394 571 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 MIR203B-201ENST00000636080 86 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 BX649567.1-201ENST00000642071 1134 ntBASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
UPF3BQ9BZI7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.59□□□□□ -2
UPF3BQ9BZI7 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 CKAP2P1-201ENST00000555477 2049 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 BTF3P7-201ENST00000407097 488 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 MTND1P23-201ENST00000416931 372 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 PABPC1P3-201ENST00000469174 459 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 CBX3P3-201ENST00000508108 532 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 CDC42P4-201ENST00000510507 563 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 SNORA70.16-201ENST00000516390 95 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC026464.5-201ENST00000562497 722 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.58□□□□□ -2
UPF3BQ9BZI7 MIR5694-201ENST00000581190 76 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC025811.1-201ENST00000604312 472 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC079791.1-201ENST00000605356 973 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC012443.1-201ENST00000605605 231 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC040168.1-201ENST00000623594 991 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC093591.3-201ENST00000634516 308 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC111188.2-201ENST00000529697 1387 ntBASIC2.58□□□□□ -2
UPF3BQ9BZI7 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.58□□□□□ -2
UPF3BQ9BZI7 AC092881.1-201ENST00000638218 2733 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 NUP58P1-201ENST00000502546 1738 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 Y_RNA.140-201ENST00000363474 103 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AL121978.1-201ENST00000402778 359 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AL133384.1-201ENST00000412744 351 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AL365496.1-201ENST00000426885 215 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 WARS2P1-201ENST00000429678 537 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 MTND4LP10-201ENST00000435146 291 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AL118520.1-201ENST00000450770 291 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 SNRPGP6-201ENST00000451124 220 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC068587.2-201ENST00000478386 781 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.57□□□□□ -2
UPF3BQ9BZI7 RNU6-1053P-201ENST00000515930 101 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC087808.1-201ENST00000520501 361 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.57□□□□□ -2
UPF3BQ9BZI7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC095057.3-201ENST00000567102 1157 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC103810.1-201ENST00000579873 453 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AP000942.3-201ENST00000603702 160 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC068313.1-201ENST00000604028 1008 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 MIR6895-201ENST00000613497 78 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC027309.3-201ENST00000623419 351 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 AL590396.2-201ENST00000636511 1041 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
UPF3BQ9BZI7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
UPF3BQ9BZI7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.57□□□□□ -2
UPF3BQ9BZI7 AC022336.2-201ENST00000568966 2538 ntBASIC2.57□□□□□ -2
UPF3BQ9BZI7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 AL139276.1-201ENST00000311910 1001 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPF3BQ9BZI7 MIR144-201ENST00000384886 86 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 RNU6-77P-201ENST00000410554 91 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 Z75741.2-201ENST00000417272 1167 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 USP9YP27-201ENST00000418455 438 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 MORF4L1P6-201ENST00000418771 268 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 MTND4P24-201ENST00000424002 397 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 AL035410.1-201ENST00000427409 427 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.56□□□□□ -2
UPF3BQ9BZI7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 CABYRP1-201ENST00000465493 1045 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 TRBV1-201ENST00000476502 284 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 RPL9P6-201ENST00000492764 598 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 AC117522.2-201ENST00000510049 657 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 RNA5SP471-201ENST00000516971 106 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 AC011260.1-201ENST00000578420 472 ntBASIC2.56□□□□□ -2
UPF3BQ9BZI7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.56□□□□□ -2
UPF3BQ9BZI7 AP002826.1-201ENST00000608835 315 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms