Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.12□□□□□ -2.07
CDCA4Q9BXL8 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
CDCA4Q9BXL8 AC011330.2-201ENST00000621680 635 ntBASIC2.12□□□□□ -2.07
CDCA4Q9BXL8 AC010872.1-201ENST00000624225 675 ntBASIC2.12□□□□□ -2.07
CDCA4Q9BXL8 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.12□□□□□ -2.07
CDCA4Q9BXL8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 RN7SKP226-201ENST00000364912 300 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 RNU1-52P-201ENST00000384190 164 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 RNU6-878P-201ENST00000384578 110 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 MIR524-201ENST00000385242 87 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AL139039.1-201ENST00000401900 692 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 Z75741.2-201ENST00000417272 1167 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 BEND7P1-201ENST00000422058 457 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AL512661.1-201ENST00000434586 1253 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AL050341.1-201ENST00000447743 313 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 GTF2IP12-201ENST00000456547 356 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 FAM172BP-201ENST00000487497 1089 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 GZMAP1-201ENST00000503054 631 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 MTCYBP17-201ENST00000503579 789 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC048346.1-201ENST00000510247 144 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC114781.4-201ENST00000513707 639 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC118465.1-201ENST00000513820 1271 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 RN7SKP24-201ENST00000515888 284 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 CR383656.7-201ENST00000548164 174 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC008127.2-201ENST00000549925 1075 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 MTCO1P40-201ENST00000574371 625 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 VN1R78P-201ENST00000597393 564 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AL031176.1-201ENST00000604554 466 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC026790.2-201ENST00000606282 430 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC135507.1-201ENST00000607214 561 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 AC090772.4-201ENST00000623599 362 ntBASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.11□□□□□ -2.07
CDCA4Q9BXL8 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 RNA5SP37-201ENST00000365420 130 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 MTCO2P31-201ENST00000402702 684 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 NDUFB4P7-201ENST00000423198 363 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AL512637.2-201ENST00000431287 1256 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC241584.1-201ENST00000438469 1241 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AL096803.2-201ENST00000450032 677 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 RPL7P55-201ENST00000450522 746 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 CDC42P1-201ENST00000456658 548 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC004263.1-201ENST00000479327 332 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC090096.1-201ENST00000489168 390 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC023424.2-201ENST00000493479 777 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 EIF4EP3-201ENST00000498782 656 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC147055.4-201ENST00000504399 745 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC113420.1-201ENST00000507903 571 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC017037.2-201ENST00000513850 890 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 RNU4-29P-201ENST00000515943 174 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 RNA5SP135-201ENST00000517019 125 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC093519.1-201ENST00000566109 298 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC068135.2-201ENST00000569293 1028 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 MIR4658-201ENST00000584344 65 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC100814.1-201ENST00000606963 623 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AL449363.1-201ENST00000617815 186 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AL512506.2-201ENST00000624472 458 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 MIR1291-201ENST00000627649 87 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 IGHVIII-44-202ENST00000636235 289 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 AC009902.3-201ENST00000606235 2172 ntBASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CDCA4Q9BXL8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms