Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 MIR3667-201ENST00000581025 74 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL670379.6-201ENST00000603753 252 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL670379.1-201ENST00000604752 252 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 MTND4LP5-201ENST00000605152 292 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL670379.5-201ENST00000605253 252 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL670379.8-201ENST00000605353 252 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL670379.7-201ENST00000605823 252 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL161423.1-201ENST00000613700 262 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AL161637.1-201ENST00000622380 412 ntBASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SSBP3Q9BWW4 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC074029.4-201ENST00000624796 1859 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC011978.2-201ENST00000569835 2054 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC027228.2-201ENST00000567141 2154 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 OR56A5-201ENST00000340110 738 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 Y_RNA.314-201ENST00000365114 102 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 RPL21P1-201ENST00000399532 476 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 U3.32-201ENST00000408116 212 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 RNA5SP111-201ENST00000411386 101 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 RPL37P18-201ENST00000411602 243 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC096664.2-201ENST00000411843 406 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AL049745.1-201ENST00000433953 286 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 RPL21P2-201ENST00000440049 481 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AL450023.3-201ENST00000440592 271 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 Z95327.1-201ENST00000446082 482 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 RPS17P13-201ENST00000448974 407 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC010733.1-201ENST00000451515 401 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AL354710.1-201ENST00000453641 246 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC135721.1-201ENST00000497954 479 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 MRPS33P2-201ENST00000507850 322 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 Y_RNA.715-201ENST00000517082 110 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC007991.1-201ENST00000522680 631 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 CYCSP27-201ENST00000527643 293 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC092470.1-201ENST00000546187 132 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC091516.1-201ENST00000549191 703 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 SAMMSON-226ENST00000642089 1582 ntBASIC4.09□□□□□ -1.75
SSBP3Q9BWW4 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
SSBP3Q9BWW4 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 Y_RNA.14-201ENST00000362415 103 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 Y_RNA.60-201ENST00000362831 98 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 RNA5SP87-201ENST00000384155 118 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AL109755.1-201ENST00000401791 649 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AL445189.1-201ENST00000405722 338 ntBASIC4.08□□□□□ -1.76
SSBP3Q9BWW4 AC009313.2-201ENST00000417893 1941 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms