Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-1331P-201ENST00000363658 106 ntBASIC2.41□□□□□ -2.02
IFT140Q96RY7 RPS6P14-201ENST00000425165 719 ntBASIC2.41□□□□□ -2.02
IFT140Q96RY7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.41□□□□□ -2.02
IFT140Q96RY7 LSM1P1-201ENST00000438629 273 ntBASIC2.41□□□□□ -2.02
IFT140Q96RY7 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
IFT140Q96RY7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.41□□□□□ -2.02
IFT140Q96RY7 AC080078.3-201ENST00000605407 463 ntBASIC2.41□□□□□ -2.02
IFT140Q96RY7 AC126118.1-201ENST00000607744 628 ntBASIC2.41□□□□□ -2.02
IFT140Q96RY7 MIR6788-201ENST00000618842 66 ntBASIC2.41□□□□□ -2.02
IFT140Q96RY7 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.41□□□□□ -2.02
IFT140Q96RY7 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.4□□□□□ -2.02
IFT140Q96RY7 AP000560.1-201ENST00000624150 1937 ntBASIC2.4□□□□□ -2.02
IFT140Q96RY7 AL596028.1-201ENST00000326971 197 ntBASIC2.4□□□□□ -2.02
IFT140Q96RY7 AC109780.2-201ENST00000413467 845 ntBASIC2.4□□□□□ -2.02
IFT140Q96RY7 BLOC1S2P1-201ENST00000428431 301 ntBASIC2.4□□□□□ -2.02
IFT140Q96RY7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.4□□□□□ -2.02
IFT140Q96RY7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
IFT140Q96RY7 RPS29P1-201ENST00000465274 159 ntBASIC2.4□□□□□ -2.02
IFT140Q96RY7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.4□□□□□ -2.02
IFT140Q96RY7 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.4□□□□□ -2.02
IFT140Q96RY7 MIR5694-201ENST00000581190 76 ntBASIC2.4□□□□□ -2.02
IFT140Q96RY7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
IFT140Q96RY7 HSPE1P11-201ENST00000339579 310 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 MIR520E-201ENST00000384867 87 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 MIR144-201ENST00000384886 86 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.39□□□□□ -2.03
IFT140Q96RY7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.39□□□□□ -2.03
IFT140Q96RY7 Z85994.2-201ENST00000434327 452 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 HMGB1P26-201ENST00000452520 628 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.39□□□□□ -2.03
IFT140Q96RY7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.39□□□□□ -2.03
IFT140Q96RY7 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.39□□□□□ -2.03
IFT140Q96RY7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
IFT140Q96RY7 NUP58P1-201ENST00000502546 1738 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 PRELID3BP11-201ENST00000414230 479 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.39□□□□□ -2.03
IFT140Q96RY7 RPL21P104-201ENST00000464143 478 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AC004223.1-201ENST00000479840 271 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AC023050.1-201ENST00000498198 304 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AC008885.2-201ENST00000509506 930 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.39□□□□□ -2.03
IFT140Q96RY7 RPPH1-2P-201ENST00000516688 293 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AF279873.1-201ENST00000523393 313 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 MIR4448-201ENST00000584360 86 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
IFT140Q96RY7 BNIP3P4-201ENST00000604946 565 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 AC096586.2-201ENST00000610260 441 ntBASIC2.39□□□□□ -2.03
IFT140Q96RY7 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
IFT140Q96RY7 AC110792.3-201ENST00000595906 1614 ntBASIC2.38□□□□□ -2.03
IFT140Q96RY7 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
IFT140Q96RY7 U8.1-201ENST00000362843 134 ntBASIC2.38□□□□□ -2.03
IFT140Q96RY7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.38□□□□□ -2.03
IFT140Q96RY7 AC093084.1-201ENST00000424233 687 ntBASIC2.38□□□□□ -2.03
IFT140Q96RY7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.38□□□□□ -2.03
IFT140Q96RY7 MTND2P29-201ENST00000438595 412 ntBASIC2.38□□□□□ -2.03
IFT140Q96RY7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.38□□□□□ -2.03
IFT140Q96RY7 AC006390.1-201ENST00000508068 283 ntBASIC2.38□□□□□ -2.03
IFT140Q96RY7 AL109653.1-201ENST00000603091 248 ntBASIC2.38□□□□□ -2.03
IFT140Q96RY7 AC008121.3-201ENST00000618726 433 ntBASIC2.38□□□□□ -2.03
IFT140Q96RY7 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
IFT140Q96RY7 RNU6-1080P-201ENST00000383982 107 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 SUMO2P12-201ENST00000405924 140 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.37□□□□□ -2.03
IFT140Q96RY7 MTCYBP7-201ENST00000419540 1134 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 ELOCP6-201ENST00000429066 328 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
IFT140Q96RY7 AC069277.2-201ENST00000454211 432 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 ELOCP12-201ENST00000458706 328 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 RPS3AP22-201ENST00000488297 769 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 RNU6-711P-201ENST00000517255 106 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.37□□□□□ -2.03
IFT140Q96RY7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.37□□□□□ -2.03
IFT140Q96RY7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC2.37□□□□□ -2.03
IFT140Q96RY7 MIR4285-201ENST00000581001 85 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 VN1R81P-201ENST00000602085 372 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 AC025016.1-201ENST00000616746 682 ntBASIC2.37□□□□□ -2.03
IFT140Q96RY7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
IFT140Q96RY7 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
IFT140Q96RY7 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
IFT140Q96RY7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 CKS1BP5-201ENST00000434172 273 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.36□□□□□ -2.03
IFT140Q96RY7 RPL17P49-201ENST00000443728 411 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.36□□□□□ -2.03
IFT140Q96RY7 MTND3P6-201ENST00000485242 339 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 AC090096.1-201ENST00000489168 390 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.36□□□□□ -2.03
IFT140Q96RY7 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.36□□□□□ -2.03
IFT140Q96RY7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.36□□□□□ -2.03
IFT140Q96RY7 TRAV28-201ENST00000557548 323 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 AC024614.2-201ENST00000577584 372 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 MTATP6P3-201ENST00000581686 676 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.36□□□□□ -2.03
IFT140Q96RY7 AP000676.4-201ENST00000624659 623 ntBASIC2.36□□□□□ -2.03
IFT140Q96RY7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
IFT140Q96RY7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
IFT140Q96RY7 CDC27P3-201ENST00000635418 1910 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
IFT140Q96RY7 Y_RNA.36-201ENST00000362602 112 ntBASIC2.35□□□□□ -2.03
IFT140Q96RY7 RNU6-1180P-201ENST00000364935 107 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms