Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 PTENP1-201ENST00000447117 1215 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 AL162389.1-201ENST00000449233 177 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 USP9YP10-201ENST00000454868 628 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC021382.1-201ENST00000483523 359 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC147055.4-201ENST00000504399 745 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC024589.1-201ENST00000512207 263 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC022662.1-201ENST00000580252 331 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 GLUD1P4-201ENST00000590914 418 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 RPP40P2-201ENST00000603596 712 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.89□□□□□ -1.95
VPS35Q96QK1 GABRG2-229ENST00000641017 3628 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 TPTE2P4-201ENST00000258589 1605 ntBASIC2.89□□□□□ -1.95
VPS35Q96QK1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VPS35Q96QK1 RNU5E-8P-201ENST00000363502 116 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 RNU6-289P-201ENST00000364093 107 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 RNU6-1078P-201ENST00000364522 103 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 SNORA36C-201ENST00000384289 132 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 MIR514A1-201ENST00000385133 98 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 AL356421.1-201ENST00000403255 413 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 MTCO2P8-201ENST00000412213 658 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 NDUFB4P7-201ENST00000423198 363 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 AL356867.1-201ENST00000429623 299 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 TAAR7P-201ENST00000436141 242 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 EEF1E1P1-201ENST00000446998 430 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 AC010099.1-201ENST00000455434 375 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 AP003497.1-201ENST00000528472 562 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 AC013553.2-201ENST00000604244 589 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 AC080013.3-201ENST00000606839 578 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 AL133445.2-201ENST00000611191 527 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 AC135507.2-201ENST00000612443 309 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.88□□□□□ -1.95
VPS35Q96QK1 AC106754.1-201ENST00000562632 1513 ntBASIC2.88□□□□□ -1.95
VPS35Q96QK1 AP000526.1-201ENST00000603308 1388 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 OR4G2P-202ENST00000641004 1759 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 RNU6-799P-201ENST00000363567 107 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 RNU6-744P-201ENST00000365557 107 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 RNU6-1316P-201ENST00000384242 108 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC106883.1-201ENST00000418805 562 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AL590383.1-201ENST00000428602 75 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 MTCO2P20-201ENST00000437339 673 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC009237.8-201ENST00000445492 379 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 SETP11-201ENST00000473027 690 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC080014.1-201ENST00000496877 1201 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 DSTNP2-201ENST00000504533 515 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 SCGB1D5P-201ENST00000515134 247 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS35Q96QK1 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 DNAJC8P1-201ENST00000554535 372 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AL132857.1-201ENST00000555180 708 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 MTCO3P13-201ENST00000577757 781 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC068313.1-201ENST00000604028 1008 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 NUTF2P8-201ENST00000604593 363 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AC090186.1-201ENST00000605991 572 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AL603758.1-201ENST00000618654 241 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 AL159972.1-201ENST00000625150 448 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS35Q96QK1 AP000776.1-201ENST00000530032 1663 ntBASIC2.87□□□□□ -1.95
VPS35Q96QK1 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.87□□□□□ -1.95
VPS35Q96QK1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VPS35Q96QK1 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VPS35Q96QK1 SDAD1P2-201ENST00000441308 2028 ntBASIC2.86□□□□□ -1.95
VPS35Q96QK1 FAM35BP-202ENST00000497389 3337 ntBASIC2.86□□□□□ -1.95
VPS35Q96QK1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms