Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MIR9-1-201ENST00000385198 89 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AL590084.1-201ENST00000407885 387 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AL513477.1-202ENST00000417061 214 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 CCDC58P2-201ENST00000417131 366 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AL356320.2-201ENST00000417263 507 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC112220.1-201ENST00000434628 355 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 RPL23AP76-201ENST00000441860 458 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 RNU7-136P-201ENST00000458819 69 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 SNORD109B-201ENST00000458961 67 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 SNORD109A-201ENST00000459128 67 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 RPL30P5-201ENST00000494923 336 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC147055.4-201ENST00000504399 745 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 XKRY-201ENST00000510392 1100 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 RNU6-826P-201ENST00000516827 104 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC103783.1-201ENST00000520506 373 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC005832.3-201ENST00000537929 631 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC090615.1-201ENST00000577519 154 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 RPL12P50-201ENST00000603116 116 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 OR2AS2P-201ENST00000606902 342 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC007998.5-201ENST00000622938 237 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC103798.2-201ENST00000624292 632 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 AC006378.2-201ENST00000623178 2476 ntBASIC2.79□□□□□ -1.96
RPRD1AQ96P16 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RPRD1AQ96P16 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AL022578.1-201ENST00000439330 1433 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 RNU5A-1-201ENST00000362698 116 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 RNU6-859P-201ENST00000362728 107 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 Y_RNA.234-201ENST00000364409 97 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 Y_RNA.472-201ENST00000384322 102 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 MIR1290-201ENST00000408735 78 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 RNA5SP80-201ENST00000410475 111 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 RNU2-52P-201ENST00000410680 190 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC234775.1-201ENST00000454247 670 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC092798.1-201ENST00000458542 409 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC104982.1-201ENST00000478775 574 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC090525.1-201ENST00000479116 478 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 HSPE1P6-201ENST00000479457 291 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 RAC1P5-201ENST00000512182 576 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC008837.2-201ENST00000513076 418 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 HMGB1P6-201ENST00000569046 646 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC090079.2-201ENST00000575289 768 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC013553.2-201ENST00000604244 589 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC104763.3-201ENST00000613765 618 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC068880.5-201ENST00000624331 290 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AL138960.2-201ENST00000625145 535 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 AC106858.1-201ENST00000637497 429 ntBASIC2.78□□□□□ -1.96
RPRD1AQ96P16 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
RPRD1AQ96P16 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 RNU6-270P-201ENST00000364131 105 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC019097.1-201ENST00000424783 735 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC063976.3-201ENST00000426849 329 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 ARL5AP4-201ENST00000430731 512 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 MTND4P6-201ENST00000438297 472 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC009961.3-201ENST00000449832 765 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 BX322784.1-201ENST00000455793 1077 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC103975.1-201ENST00000482506 483 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 TTC39CP1-201ENST00000512513 755 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 MTND5P4-201ENST00000514978 288 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC025881.1-201ENST00000518851 512 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AL133271.1-201ENST00000538229 291 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 ACTR3BP3-201ENST00000565577 979 ntBASIC2.77□□□□□ -1.97
RPRD1AQ96P16 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms