Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RNU4-91P-201ENST00000364778 135 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 AC090515.1-201ENST00000465295 476 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 AC090453.1-201ENST00000495560 436 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 AC107918.3-201ENST00000533272 382 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 AC067852.7-201ENST00000623270 535 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 MIR924-201ENST00000638017 53 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 MIR365B-201ENST00000362317 111 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 RNU2-22P-201ENST00000411266 212 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 HMGN2P18-201ENST00000450680 270 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 snoU13.3-201ENST00000459441 104 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 AC023424.2-201ENST00000493479 777 ntBASIC1.23□□□□□ -2.21
SPG11Q96JI7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.23□□□□□ -2.21
SPG11Q96JI7 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
SPG11Q96JI7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.22□□□□□ -2.21
SPG11Q96JI7 SNRPEP3-201ENST00000338402 276 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 SNORA62.2-201ENST00000364672 152 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 AL512504.1-201ENST00000415494 778 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 RNU6-1132P-201ENST00000459214 107 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC087190.1-201ENST00000484462 480 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC104115.2-201ENST00000523026 687 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 MIR3935-201ENST00000583472 104 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 BNIP3P4-201ENST00000604946 565 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 BNIP3P7-201ENST00000605641 516 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.22□□□□□ -2.21
SPG11Q96JI7 AC087588.2-201ENST00000617667 426 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 PABPC1P9-201ENST00000426076 1612 ntBASIC1.22□□□□□ -2.21
SPG11Q96JI7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.21□□□□□ -2.21
SPG11Q96JI7 VTRNA1-1-201ENST00000363120 99 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 MIR222-201ENST00000384992 110 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.21□□□□□ -2.22
SPG11Q96JI7 AC004022.1-201ENST00000447766 1066 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 HMGN1P8-201ENST00000463578 288 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.21□□□□□ -2.22
SPG11Q96JI7 AC012531.5-201ENST00000611375 151 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 FO624990.1-201ENST00000636373 85 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 RNU6-461P-201ENST00000364195 107 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.21□□□□□ -2.22
SPG11Q96JI7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.21□□□□□ -2.22
SPG11Q96JI7 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 AC114973.1-201ENST00000429057 632 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.21□□□□□ -2.22
SPG11Q96JI7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.21□□□□□ -2.22
SPG11Q96JI7 RNU11-2P-201ENST00000516898 142 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 PDCD5P1-201ENST00000543528 309 ntBASIC1.21□□□□□ -2.22
SPG11Q96JI7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.21□□□□□ -2.22
SPG11Q96JI7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SPG11Q96JI7 MIR320A-201ENST00000385302 82 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 RNA5SP489-201ENST00000410986 109 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 AC013470.3-201ENST00000420252 1194 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 HMGN2P38-201ENST00000423806 265 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 OR10R1P-201ENST00000441524 1141 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 TPRKBP1-201ENST00000456243 481 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.2□□□□□ -2.22
SPG11Q96JI7 AP000926.1-201ENST00000479573 241 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 AC110792.2-201ENST00000510278 224 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 RNU6ATAC39P-201ENST00000516309 149 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 OR4K8P-201ENST00000578842 1048 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 AC010487.4-201ENST00000637027 61 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 MIR6715B-201ENST00000637172 77 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 ICE2P2-201ENST00000483823 2787 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 MRPS36P1-201ENST00000421291 307 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 MTND2P9-201ENST00000422293 931 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 AIMP1P2-201ENST00000425294 312 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 AC104229.1-201ENST00000561364 255 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 AP000254.1-201ENST00000609934 520 ntBASIC1.2□□□□□ -2.22
SPG11Q96JI7 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.19□□□□□ -2.22
SPG11Q96JI7 HMGN2P35-201ENST00000412164 270 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 RPL17P12-201ENST00000413391 526 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SPG11Q96JI7 SNORA31.26-201ENST00000517250 137 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 OR8X1P-201ENST00000534542 869 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.19□□□□□ -2.22
SPG11Q96JI7 AL449363.1-201ENST00000617815 186 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SPG11Q96JI7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPG11Q96JI7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SPG11Q96JI7 Z99497.1-201ENST00000421282 135 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.19□□□□□ -2.22
SPG11Q96JI7 HMGB3P21-201ENST00000452483 547 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 AC089999.1-201ENST00000460336 374 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 AC139103.1-201ENST00000534696 1030 ntBASIC1.19□□□□□ -2.22
SPG11Q96JI7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms