Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 ZNF37BP-203ENST00000452306 1352 ntBASIC2.18□□□□□ -2.06
RTL9Q8NET4 RNU6-386P-201ENST00000362650 107 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 RNU4-52P-201ENST00000384209 138 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 RNU4-31P-201ENST00000384211 141 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 RPL23AP39-201ENST00000415533 405 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.17□□□□□ -2.06
RTL9Q8NET4 CDC42P1-201ENST00000456658 548 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC010285.1-201ENST00000470580 392 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.17□□□□□ -2.06
RTL9Q8NET4 MTCO3P44-201ENST00000510977 541 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC117532.1-201ENST00000514638 323 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.17□□□□□ -2.06
RTL9Q8NET4 MIR3935-201ENST00000583472 104 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.17□□□□□ -2.06
RTL9Q8NET4 AL009028.1-201ENST00000604895 802 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.17□□□□□ -2.06
RTL9Q8NET4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.17□□□□□ -2.06
RTL9Q8NET4 AC006963.1-201ENST00000624003 1052 ntBASIC2.17□□□□□ -2.06
RTL9Q8NET4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RTL9Q8NET4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
RTL9Q8NET4 HSPE1P11-201ENST00000339579 310 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 RNU1-52P-201ENST00000384190 164 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 RNU4-72P-201ENST00000410754 173 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 MTCO3P4-201ENST00000419236 787 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 RPL7P37-201ENST00000425095 738 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 AC114973.1-201ENST00000429057 632 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 AL627224.1-201ENST00000448334 444 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 AC090515.1-201ENST00000465295 476 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 AC108078.2-201ENST00000510750 236 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 POLR2KP1-201ENST00000553226 168 ntBASIC2.16□□□□□ -2.06
RTL9Q8NET4 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.16□□□□□ -2.06
RTL9Q8NET4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
RTL9Q8NET4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RTL9Q8NET4 SNORA67.5-201ENST00000391036 107 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
RTL9Q8NET4 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.15□□□□□ -2.07
RTL9Q8NET4 HMGN2P38-201ENST00000423806 265 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 IPO7P1-201ENST00000442031 636 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.15□□□□□ -2.07
RTL9Q8NET4 AL139109.1-201ENST00000455491 297 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 AC090453.1-201ENST00000495560 436 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 CBX3P4-201ENST00000538909 354 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.15□□□□□ -2.07
RTL9Q8NET4 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
RTL9Q8NET4 MIR6076-201ENST00000617521 113 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 AC010872.1-201ENST00000624225 675 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 HPVC1-201ENST00000629899 1198 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.15□□□□□ -2.07
RTL9Q8NET4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
RTL9Q8NET4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.15□□□□□ -2.07
RTL9Q8NET4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
RTL9Q8NET4 HMGB1P5-201ENST00000255320 642 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.14□□□□□ -2.07
RTL9Q8NET4 RNU6-1072P-201ENST00000384703 107 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 RNU6-443P-201ENST00000384780 107 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 MTATP6P31-201ENST00000406985 692 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AL590762.3-201ENST00000436372 640 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC008427.1-201ENST00000503102 655 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC111193.1-201ENST00000504097 155 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC004062.1-201ENST00000509926 645 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC016065.2-201ENST00000514530 444 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC025857.1-201ENST00000525252 377 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 RPS3AP4-201ENST00000555161 764 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC107954.1-201ENST00000565906 727 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AL035411.2-201ENST00000604022 421 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.14□□□□□ -2.07
RTL9Q8NET4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.14□□□□□ -2.07
RTL9Q8NET4 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.14□□□□□ -2.07
RTL9Q8NET4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
RTL9Q8NET4 Z98749.2-208ENST00000381646 500 ntBASIC2.13□□□□□ -2.07
RTL9Q8NET4 RNA5SP252-201ENST00000391131 119 ntBASIC2.13□□□□□ -2.07
RTL9Q8NET4 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 AL645568.3-201ENST00000433683 316 ntBASIC2.13□□□□□ -2.07
RTL9Q8NET4 HMGB1P31-201ENST00000437242 427 ntBASIC2.13□□□□□ -2.07
RTL9Q8NET4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
RTL9Q8NET4 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 AC117525.1-201ENST00000515228 503 ntBASIC2.13□□□□□ -2.07
RTL9Q8NET4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 NDUFS5P6-201ENST00000529136 295 ntBASIC2.13□□□□□ -2.07
RTL9Q8NET4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 DNAJC19P9-201ENST00000555084 351 ntBASIC2.13□□□□□ -2.07
RTL9Q8NET4 AC009127.3-201ENST00000570531 403 ntBASIC2.13□□□□□ -2.07
RTL9Q8NET4 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.13□□□□□ -2.07
RTL9Q8NET4 APOOP1-201ENST00000604695 592 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms