Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RNU6-1078P-201ENST00000364522 103 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 RNU6-343P-201ENST00000364709 104 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 USP9YP33-201ENST00000412220 421 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 RPL32P35-201ENST00000415214 394 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC098592.1-201ENST00000419352 333 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AL365203.2-201ENST00000423444 196 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 RPL7P46-201ENST00000425129 740 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AL593851.1-201ENST00000426171 157 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 USP9YP35-201ENST00000435696 412 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AL445567.1-201ENST00000439121 144 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 MTND5P14-201ENST00000441481 1267 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC093392.2-201ENST00000450682 337 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 SNRPGP6-201ENST00000451124 220 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AL049874.1-201ENST00000489560 388 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC147055.4-201ENST00000504399 745 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 Y_RNA.688-201ENST00000516565 95 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 OR7K1P-201ENST00000546439 926 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AL353997.4-201ENST00000586196 166 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AL603755.1-201ENST00000619504 163 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC099506.2-201ENST00000623074 221 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AP000676.3-201ENST00000623299 569 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 AC079248.2-201ENST00000623779 326 ntBASIC3.21□□□□□ -1.9
RTL3Q8N8U3 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTL3Q8N8U3 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AL079305.1-201ENST00000623159 3008 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC073346.2-201ENST00000624724 2058 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 SNORA70.4-201ENST00000365509 134 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 RNU6-1207P-201ENST00000384343 107 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AL356421.1-201ENST00000403255 413 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC007899.1-201ENST00000412776 775 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 USP9YP26-201ENST00000421008 661 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC011233.1-201ENST00000422812 283 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 MTND4P20-201ENST00000424125 869 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC009237.8-201ENST00000445492 379 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 SNORD121B-201ENST00000458838 81 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 MEMO1P3-201ENST00000459811 302 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC105313.1-201ENST00000509121 353 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 HSPE1P23-201ENST00000509838 286 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC024589.1-201ENST00000512207 263 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC118465.1-201ENST00000513820 1271 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 GMPSP1-201ENST00000514075 579 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC090888.1-201ENST00000561335 1141 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 ISCA1P3-201ENST00000577104 373 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 MIR5195-201ENST00000583555 115 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC072039.2-201ENST00000608883 439 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC093783.1-201ENST00000612976 329 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 MIR3651-201ENST00000630427 90 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 DDX43P2-201ENST00000604753 1354 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTL3Q8N8U3 SRP72P2-201ENST00000344851 1979 ntBASIC3.2□□□□□ -1.9
RTL3Q8N8U3 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 RNA5SP139-201ENST00000364340 117 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 SNORD116-2-201ENST00000384274 95 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 SNORD116-6-201ENST00000384711 96 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC009518.2-201ENST00000418056 731 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AL390023.1-201ENST00000428836 262 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AL512649.1-201ENST00000428997 581 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AC006946.1-201ENST00000429106 328 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 ZYG11AP1-201ENST00000430329 837 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.19□□□□□ -1.9
RTL3Q8N8U3 RPL23AP22-201ENST00000437556 453 ntBASIC3.19□□□□□ -1.9
RTL3Q8N8U3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms