Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 RNU7-27P-201ENST00000459281 62 ntBASIC2.21□□□□□ -2.06
VPS8Q8N3P4 RBM43P1-201ENST00000476891 1081 ntBASIC2.21□□□□□ -2.06
VPS8Q8N3P4 MTND3P24-201ENST00000506306 329 ntBASIC2.21□□□□□ -2.06
VPS8Q8N3P4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VPS8Q8N3P4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS8Q8N3P4 RNA5SP61-201ENST00000516453 100 ntBASIC2.21□□□□□ -2.06
VPS8Q8N3P4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS8Q8N3P4 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS8Q8N3P4 AL589994.2-201ENST00000621124 579 ntBASIC2.21□□□□□ -2.06
VPS8Q8N3P4 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.21□□□□□ -2.06
VPS8Q8N3P4 AL356118.1-201ENST00000635272 1078 ntBASIC2.21□□□□□ -2.06
VPS8Q8N3P4 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
VPS8Q8N3P4 RNU1-57P-201ENST00000384491 166 ntBASIC2.2□□□□□ -2.06
VPS8Q8N3P4 RPS7P2-201ENST00000435134 607 ntBASIC2.2□□□□□ -2.06
VPS8Q8N3P4 RPS15AP34-201ENST00000487776 387 ntBASIC2.2□□□□□ -2.06
VPS8Q8N3P4 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS8Q8N3P4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS8Q8N3P4 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS8Q8N3P4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.2□□□□□ -2.06
VPS8Q8N3P4 Y_RNA.675-201ENST00000516389 149 ntBASIC2.2□□□□□ -2.06
VPS8Q8N3P4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.2□□□□□ -2.06
VPS8Q8N3P4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.2□□□□□ -2.06
VPS8Q8N3P4 AP003717.3-201ENST00000544832 1180 ntBASIC2.2□□□□□ -2.06
VPS8Q8N3P4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.2□□□□□ -2.06
VPS8Q8N3P4 AL713998.2-201ENST00000604538 1198 ntBASIC2.2□□□□□ -2.06
VPS8Q8N3P4 AC006329.2-201ENST00000611491 394 ntBASIC2.2□□□□□ -2.06
VPS8Q8N3P4 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 MTCYBP7-201ENST00000419540 1134 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AC096632.1-201ENST00000427395 310 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 COX6CP12-201ENST00000446748 202 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 TPMTP4-201ENST00000450749 678 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AL031183.1-201ENST00000457667 207 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 FAM172BP-201ENST00000487497 1089 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 ERHP1-201ENST00000523006 310 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AL110115.1-201ENST00000614396 364 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AC098657.3-201ENST00000620434 263 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 MTCO1P4-201ENST00000520516 1409 ntBASIC2.19□□□□□ -2.06
VPS8Q8N3P4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
VPS8Q8N3P4 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS8Q8N3P4 AL592494.3-201ENST00000609485 464 ntBASIC2.18□□□□□ -2.06
VPS8Q8N3P4 MTND5P10-201ENST00000603719 1809 ntBASIC2.18□□□□□ -2.06
VPS8Q8N3P4 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS8Q8N3P4 ZNF209P-201ENST00000593450 2304 ntBASIC2.18□□□□□ -2.06
VPS8Q8N3P4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
VPS8Q8N3P4 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS8Q8N3P4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 MIR320B1-201ENST00000390209 79 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 RPL26P37-201ENST00000411983 438 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 MORF4L1P7-201ENST00000426038 703 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC092473.1-201ENST00000441098 221 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AL121871.1-201ENST00000443413 436 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 TRMT112P2-201ENST00000512910 132 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 MIR203B-201ENST00000636080 86 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC007342.9-201ENST00000623877 1385 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 RNU6-234P-201ENST00000365229 104 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 MIR524-201ENST00000385242 87 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC023347.2-201ENST00000433994 462 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 FO393415.2-201ENST00000480085 343 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 RAC1P5-201ENST00000512182 576 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC068338.1-201ENST00000565567 176 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS8Q8N3P4 SEPT7P9-203ENST00000604116 343 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 AC007620.3-201ENST00000608131 497 ntBASIC2.17□□□□□ -2.06
VPS8Q8N3P4 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 MTND4P11-201ENST00000417020 1058 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 RNU1-123P-201ENST00000458950 160 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 RN7SKP277-201ENST00000516895 283 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 AC245036.5-201ENST00000596330 847 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 AC012360.2-201ENST00000609349 391 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 AC009570.1-201ENST00000609599 745 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 MIR6840-201ENST00000611937 71 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 AL109809.4-201ENST00000603520 2185 ntBASIC2.16□□□□□ -2.06
VPS8Q8N3P4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VPS8Q8N3P4 AP000648.3-201ENST00000623539 4507 ntBASIC2.15□□□□□ -2.07
VPS8Q8N3P4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS8Q8N3P4 RNA5SP38-201ENST00000410750 119 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms