Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 RNA5SP269-201ENST00000459032 137 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC010401.1-201ENST00000463867 348 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 RPL23AP14-201ENST00000468281 468 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 RN7SKP60-201ENST00000516985 239 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 FAM60DP-201ENST00000524174 632 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC123904.2-201ENST00000548059 300 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC112191.3-201ENST00000604371 277 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AL162713.1-201ENST00000604480 262 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AC121334.2-201ENST00000605387 271 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AC138749.5-201ENST00000611461 208 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AC116165.2-201ENST00000616705 206 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 AC092628.2-201ENST00000622492 339 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 SDAD1P2-201ENST00000441308 2028 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 PWAR6-201ENST00000552334 4618 ntBASIC3.35□□□□□ -1.87
LDB1Q86U70 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LDB1Q86U70 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.35□□□□□ -1.87
LDB1Q86U70 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LDB1Q86U70 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB1Q86U70 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
LDB1Q86U70 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB1Q86U70 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
LDB1Q86U70 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 RNU5A-8P-201ENST00000364102 114 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
LDB1Q86U70 SNORD116-1-201ENST00000384335 95 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 RNY3P10-201ENST00000384764 102 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AL591034.1-201ENST00000407447 340 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 RN7SKP285-201ENST00000410137 318 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 USP9YP13-201ENST00000417797 480 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC008850.1-201ENST00000427546 362 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 BX890604.2-201ENST00000427883 474 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB1Q86U70 NEK4P1-201ENST00000433383 879 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 ELOCP30-201ENST00000447108 299 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AC108059.3-201ENST00000456388 214 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 RPL31P3-201ENST00000458430 332 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB1Q86U70 RPL23AP67-201ENST00000465341 474 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 GMPSP1-201ENST00000514075 579 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 RNU6-840P-201ENST00000517275 65 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AC022616.6-201ENST00000520479 119 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AP002748.2-201ENST00000528671 348 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.34□□□□□ -1.87
LDB1Q86U70 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.34□□□□□ -1.87
LDB1Q86U70 OR4H12P-201ENST00000556269 907 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC012414.6-201ENST00000568241 401 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB1Q86U70 MIR3186-201ENST00000577404 85 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 MIR4444-1-201ENST00000581696 74 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 MIR4444-2-201ENST00000584390 74 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 PIGPP4-201ENST00000584447 307 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 MIR548AB-201ENST00000584917 84 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC008739.3-201ENST00000603262 127 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 MIR92B-201ENST00000607575 96 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AC103710.1-201ENST00000610003 901 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 AC099778.2-201ENST00000610904 211 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.34□□□□□ -1.87
LDB1Q86U70 AC092140.2-201ENST00000618027 521 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 XIST_intron.1-201ENST00000619444 68 ntBASIC3.34□□□□□ -1.87
LDB1Q86U70 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LDB1Q86U70 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LDB1Q86U70 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms