Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 Y_RNA.352-201ENST00000365439 102 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 SMIM11P1-201ENST00000369586 178 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 RNA5SP296-201ENST00000410523 111 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 DDX39BP1-205ENST00000422507 192 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 SETP5-201ENST00000437270 562 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AL450023.3-201ENST00000440592 271 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 RPS26P56-201ENST00000444468 240 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AL354714.3-201ENST00000447284 493 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC073850.1-201ENST00000449243 255 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC097484.1-201ENST00000471148 389 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 RPS29P26-201ENST00000477483 171 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC005912.1-201ENST00000495392 255 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC067942.3-201ENST00000512025 362 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 RNU6-346P-201ENST00000516288 111 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC012339.2-201ENST00000523996 453 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC104576.1-201ENST00000524225 88 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AL161616.1-201ENST00000611867 286 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC021753.1-201ENST00000635724 168 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 SCARNA15-201ENST00000607520 4325 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AL445437.1-201ENST00000623157 3087 ntBASIC4.58□□□□□ -1.68
ATG4DQ86TL0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.58□□□□□ -1.68
ATG4DQ86TL0 AC027228.2-201ENST00000567141 2154 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 MIR335-201ENST00000362173 94 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 Y_RNA.83-201ENST00000363005 113 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RNY1P16-201ENST00000363063 111 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RN7SKP115-201ENST00000363177 317 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 Y_RNA.183-201ENST00000363882 113 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RNU6-740P-201ENST00000364734 105 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RNU6-611P-201ENST00000384276 104 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC069218.2-201ENST00000411665 344 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 BTF3P6-201ENST00000448054 499 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 CEACAMP6-201ENST00000452007 574 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AL691482.1-201ENST00000453255 87 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RPS17P2-201ENST00000461663 408 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC069499.1-201ENST00000489433 509 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC135721.1-201ENST00000497954 479 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC074198.2-201ENST00000508153 258 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 SNORA25.14-201ENST00000516481 132 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RN7SKP260-201ENST00000516907 149 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RPL23AP53-201ENST00000521854 457 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 HIGD1AP5-201ENST00000529959 259 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AC011447.4-201ENST00000587562 111 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 AL359893.1-201ENST00000447628 1580 ntBASIC4.57□□□□□ -1.68
ATG4DQ86TL0 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
ATG4DQ86TL0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 PCAT14-202ENST00000627127 3935 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 Y_RNA.170-201ENST00000363746 110 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 RNU6-708P-201ENST00000384217 107 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 MIR625-201ENST00000385047 85 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ATG4DQ86TL0 AL109941.1-201ENST00000401925 229 ntBASIC4.56□□□□□ -1.68
ATG4DQ86TL0 RN7SKP125-201ENST00000410481 302 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms