Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 RNA5SP258-201ENST00000362750 119 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 Y_RNA.517-201ENST00000384551 106 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 RNU6-821P-201ENST00000390995 107 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 EEF1A1P41-201ENST00000414667 207 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 RN7SL432P-201ENST00000484057 298 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 RNU6-714P-201ENST00000516963 103 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AP003392.2-201ENST00000527269 208 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AC022878.1-201ENST00000530684 149 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AL391156.1-201ENST00000554965 554 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AC137800.2-201ENST00000574375 120 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 MTND1P15-201ENST00000579262 949 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AL669831.4-202ENST00000590817 238 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AC112191.3-201ENST00000604371 277 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 AC006566.1-201ENST00000608943 513 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 CCT4P2-201ENST00000233836 1548 ntBASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.35□□□□□ -1.71
KRT28Q7Z3Y7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 RNU6-989P-201ENST00000362756 107 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AL391417.1-201ENST00000404100 426 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AL139095.1-201ENST00000404326 391 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 RNA5SP56-201ENST00000410277 118 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 RNA5SP229-201ENST00000410809 99 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC127526.1-201ENST00000417526 366 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AIMP1P1-201ENST00000418670 937 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 USP9YP14-201ENST00000430663 563 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AL139132.1-201ENST00000431587 344 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 ST13P14-201ENST00000474095 734 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 RPS29P26-201ENST00000477483 171 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 RPS26P15-201ENST00000488067 348 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC022880.1-201ENST00000534017 973 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 EEF1B2P4-201ENST00000551398 348 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 ZNF519P3-201ENST00000557158 1032 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC015871.2-201ENST00000603605 948 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC004853.1-201ENST00000604902 698 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC008121.2-201ENST00000614647 523 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC015540.1-201ENST00000615828 501 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 SNORD39.4-201ENST00000620099 78 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 AC092125.1-201ENST00000562568 1995 ntBASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.34□□□□□ -1.71
KRT28Q7Z3Y7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRT28Q7Z3Y7 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.34□□□□□ -1.72
KRT28Q7Z3Y7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
KRT28Q7Z3Y7 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 SNORD51-201ENST00000384320 80 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 MIR124-3-201ENST00000384866 87 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 NANOGP6-201ENST00000429190 847 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 SNORD42A-201ENST00000459584 64 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC109464.2-201ENST00000510242 943 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 RNU6-405P-201ENST00000516637 110 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC034268.2-201ENST00000571784 482 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AL359999.1-201ENST00000604513 294 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC008498.1-201ENST00000613012 531 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC099506.2-201ENST00000623074 221 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AL603839.4-201ENST00000624658 1005 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 MIR622-201ENST00000638396 96 ntBASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
KRT28Q7Z3Y7 AC017071.1-201ENST00000564407 2204 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms