Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RNU6-114P-201ENST00000384704 105 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 MTND1P21-201ENST00000412991 285 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AL137014.1-201ENST00000420490 1226 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 UBE2V1P13-201ENST00000436983 439 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 MTND6P13-201ENST00000443510 523 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 VN1R34P-201ENST00000447387 883 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AL033528.1-201ENST00000453780 140 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 TPT1P7-201ENST00000458300 517 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 RPL21P129-201ENST00000491732 478 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC114967.1-201ENST00000504890 259 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AF131216.2-201ENST00000512316 564 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 IGHV3-76-201ENST00000522465 295 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 OR5D17P-201ENST00000531492 978 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC012213.3-201ENST00000577199 777 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC067852.3-201ENST00000589177 561 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC087683.1-201ENST00000591187 441 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 BNIP3P8-201ENST00000597863 560 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC068790.2-201ENST00000602601 557 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AC008121.2-201ENST00000614647 523 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AL355365.1-201ENST00000616480 294 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 AL138713.1-201ENST00000624026 2130 ntBASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
SYNE3Q6ZMZ3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 SNORA7.2-201ENST00000364446 145 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 OR5H15-201ENST00000383696 930 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 MIR591-201ENST00000385290 95 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AL356968.1-201ENST00000416622 474 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 RPL23AP82-202ENST00000427528 469 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 RPL23AP14-201ENST00000468281 468 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 RN7SL293P-201ENST00000481765 281 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC055855.1-201ENST00000489563 579 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC093278.1-201ENST00000494700 600 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC109464.2-201ENST00000510242 943 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 DUXAP2-201ENST00000519198 589 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC022616.6-201ENST00000520479 119 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC126177.3-201ENST00000551839 688 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 RPL21P5-201ENST00000554662 472 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC015917.1-201ENST00000579654 510 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 MIR4429-201ENST00000580105 73 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 MIR4444-1-201ENST00000581696 74 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC060771.1-201ENST00000582031 164 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 MIR4444-2-201ENST00000584390 74 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC008739.3-201ENST00000603262 127 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AL031176.1-201ENST00000604554 466 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AL451064.1-201ENST00000607718 471 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC103591.3-201ENST00000608684 209 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC104073.3-201ENST00000610942 955 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC091304.9-201ENST00000612091 226 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AP001506.1-201ENST00000615444 211 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AL356321.1-201ENST00000621360 228 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AL590240.3-201ENST00000621416 943 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC092326.2-201ENST00000624772 1561 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 AC058791.1-201ENST00000608412 3198 ntBASIC3.96□□□□□ -1.78
SYNE3Q6ZMZ3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 Y_RNA.359-201ENST00000365498 102 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 MIR135A2-201ENST00000384854 100 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 SNORA40.3-201ENST00000390964 122 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 SNORA48.7-201ENST00000391302 135 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 RPS3AP3-201ENST00000411933 242 ntBASIC3.95□□□□□ -1.78
SYNE3Q6ZMZ3 RAD23BP2-201ENST00000416003 1207 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms