Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 RNY3P10-201ENST00000384764 102 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 MIR449B-201ENST00000384995 97 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 RNU6-193P-201ENST00000410977 107 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AL359704.1-201ENST00000411586 781 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 RPL17P12-201ENST00000413391 526 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.77□□□□□ -1.81
FOXD4Q12950 AL356095.1-201ENST00000417217 199 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.77□□□□□ -1.81
FOXD4Q12950 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXD4Q12950 COX6B1P7-201ENST00000430845 235 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXD4Q12950 AC006011.1-201ENST00000442758 349 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 USP9YP29-201ENST00000445112 563 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXD4Q12950 CYCSP35-201ENST00000451978 304 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC087588.1-201ENST00000462203 316 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 RPS3AP50-201ENST00000487064 803 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC092185.1-201ENST00000491371 97 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.77□□□□□ -1.81
FOXD4Q12950 SUB1P1-201ENST00000524415 382 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.77□□□□□ -1.81
FOXD4Q12950 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXD4Q12950 AL133271.1-201ENST00000538229 291 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC123904.2-201ENST00000548059 300 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC098614.4-201ENST00000607601 462 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC108747.1-201ENST00000609508 535 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC039056.2-201ENST00000622261 511 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AC002064.3-201ENST00000623448 346 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.77□□□□□ -1.81
FOXD4Q12950 AC025048.6-202ENST00000627667 438 ntBASIC3.77□□□□□ -1.81
FOXD4Q12950 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.77□□□□□ -1.81
FOXD4Q12950 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
FOXD4Q12950 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
FOXD4Q12950 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXD4Q12950 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
FOXD4Q12950 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXD4Q12950 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXD4Q12950 RIOK3P1-201ENST00000418778 1528 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
FOXD4Q12950 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.76□□□□□ -1.81
FOXD4Q12950 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
FOXD4Q12950 TXNP7-201ENST00000406296 293 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXD4Q12950 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXD4Q12950 AL513331.1-201ENST00000411908 397 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC018644.1-201ENST00000429934 551 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 DLGAP5P1-201ENST00000430307 464 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 BNIP3P2-201ENST00000441221 577 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 RPS4XP4-201ENST00000443195 763 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AL162389.1-201ENST00000449233 177 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AP1S2P1-201ENST00000457344 379 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AL135752.1-201ENST00000479477 471 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC069499.1-201ENST00000489433 509 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 RPL29P14-201ENST00000495837 428 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 RAC1P5-201ENST00000512182 576 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 TTC39CP1-201ENST00000512513 755 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 RNU7-143P-201ENST00000516781 65 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 RNU6-928P-201ENST00000516876 104 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AC034105.3-201ENST00000565294 442 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC007599.1-201ENST00000568688 1174 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC025627.2-201ENST00000576220 160 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AL160281.1-201ENST00000605307 311 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.76□□□□□ -1.81
FOXD4Q12950 AC012360.2-201ENST00000609349 391 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC128687.2-201ENST00000609657 566 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 CR392039.5-201ENST00000623201 510 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC090582.1-201ENST00000636321 199 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXD4Q12950 AL390237.1-201ENST00000404226 1415 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 AC092104.1-201ENST00000497346 1441 ntBASIC3.76□□□□□ -1.81
FOXD4Q12950 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
FOXD4Q12950 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.76□□□□□ -1.81
FOXD4Q12950 MTND5P33-201ENST00000571250 1450 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 Y_RNA.46-201ENST00000362695 102 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 Y_RNA.77-201ENST00000362962 107 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 RNU6-270P-201ENST00000364131 105 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 Y_RNA.553-201ENST00000384670 102 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 RN7SKP182-201ENST00000410772 298 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 HMGN1P24-201ENST00000412282 298 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 USP9YP13-201ENST00000417797 480 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 AC104332.2-201ENST00000429959 156 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXD4Q12950 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.75□□□□□ -1.81
FOXD4Q12950 FTH1P1-201ENST00000437933 532 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 AL049734.2-201ENST00000441066 616 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 KATNBL1P3-201ENST00000443475 909 ntBASIC3.75□□□□□ -1.81
FOXD4Q12950 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms