Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RNU6-903P-201ENST00000391270 109 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC093106.2-201ENST00000428212 385 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 AC006011.1-201ENST00000442758 349 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.8□□□□□ -1.64
SSRP1Q08945 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC004062.1-201ENST00000509926 645 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC008489.1-201ENST00000524271 483 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSRP1Q08945 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC007424.1-203ENST00000554613 687 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 RPL23AP87-202ENST00000573039 466 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC005261.5-201ENST00000596280 355 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 SNRPGP15-201ENST00000600149 222 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 AL445567.2-201ENST00000618935 498 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 MIR8059-201ENST00000620427 81 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 AL589994.2-201ENST00000621124 579 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 AC011155.2-201ENST00000623202 216 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 AC100810.6-201ENST00000638068 285 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.8□□□□□ -1.64
SSRP1Q08945 AC004925.1-201ENST00000624256 2706 ntBASIC4.8□□□□□ -1.64
SSRP1Q08945 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.8□□□□□ -1.64
SSRP1Q08945 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SSRP1Q08945 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.79□□□□□ -1.64
SSRP1Q08945 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SSRP1Q08945 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.79□□□□□ -1.64
SSRP1Q08945 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SSRP1Q08945 XIAPP3-201ENST00000312918 795 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AC126755.2-208ENST00000327792 462 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AC138969.1-213ENST00000331436 462 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 SMIM11P1-201ENST00000369586 178 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 RNU6-1279P-201ENST00000383917 103 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.79□□□□□ -1.64
SSRP1Q08945 RNU6-387P-201ENST00000411331 105 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.79□□□□□ -1.64
SSRP1Q08945 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.79□□□□□ -1.64
SSRP1Q08945 AC018630.2-202ENST00000422992 927 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.79□□□□□ -1.64
SSRP1Q08945 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 NUTF2P3-201ENST00000448540 384 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 ELOCP23-201ENST00000452014 332 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.79□□□□□ -1.64
SSRP1Q08945 AL162395.1-201ENST00000457882 422 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 RPL23AP55-201ENST00000498163 452 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.79□□□□□ -1.64
SSRP1Q08945 AC108078.2-201ENST00000510750 236 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.79□□□□□ -1.64
SSRP1Q08945 SNORA31.20-201ENST00000517111 133 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 SNORA31.22-201ENST00000517204 135 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 RNU6-840P-201ENST00000517275 65 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AF186190.1-201ENST00000517470 480 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.79□□□□□ -1.64
SSRP1Q08945 ERHP1-201ENST00000523006 310 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AP003730.1-201ENST00000524605 285 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.79□□□□□ -1.64
SSRP1Q08945 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.79□□□□□ -1.64
SSRP1Q08945 CYCSP29-201ENST00000533731 318 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 RAB11AP2-201ENST00000545905 639 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AC023575.1-201ENST00000580510 358 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 SNX18P1Y-201ENST00000616231 511 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 AC068831.8-201ENST00000620171 435 ntBASIC4.79□□□□□ -1.64
SSRP1Q08945 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SSRP1Q08945 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.79□□□□□ -1.64
SSRP1Q08945 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SSRP1Q08945 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 API5P2-201ENST00000397055 1498 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
SSRP1Q08945 Y_RNA.231-201ENST00000364358 102 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 RNA5SP513-201ENST00000364648 118 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 Y_RNA.263-201ENST00000364659 114 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 SNORD115-7-201ENST00000365306 82 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 SNORA62-201ENST00000365493 153 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 RNU6-701P-201ENST00000384059 107 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 RNU6-332P-201ENST00000391193 108 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 SOD2P1-201ENST00000396543 562 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 NDUFS5P1-201ENST00000405668 289 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AL162578.1-201ENST00000406202 378 ntBASIC4.78□□□□□ -1.64
SSRP1Q08945 AL606923.1-201ENST00000406616 190 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms