Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.26□□□□□ -2.21
TFF3Q07654 RPL30P3-201ENST00000424262 333 ntBASIC1.26□□□□□ -2.21
TFF3Q07654 AC244505.5-201ENST00000443639 207 ntBASIC1.26□□□□□ -2.21
TFF3Q07654 RPS26P56-201ENST00000444468 240 ntBASIC1.26□□□□□ -2.21
TFF3Q07654 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.26□□□□□ -2.21
TFF3Q07654 AL035407.2-201ENST00000454090 378 ntBASIC1.26□□□□□ -2.21
TFF3Q07654 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.26□□□□□ -2.21
TFF3Q07654 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.26□□□□□ -2.21
TFF3Q07654 HSPE1P3-201ENST00000559254 309 ntBASIC1.26□□□□□ -2.21
TFF3Q07654 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC1.26□□□□□ -2.21
TFF3Q07654 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.26□□□□□ -2.21
TFF3Q07654 OR10AB1P-201ENST00000609613 938 ntBASIC1.26□□□□□ -2.21
TFF3Q07654 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.26□□□□□ -2.21
TFF3Q07654 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.26□□□□□ -2.21
TFF3Q07654 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.26□□□□□ -2.21
TFF3Q07654 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.26□□□□□ -2.21
TFF3Q07654 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
TFF3Q07654 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
TFF3Q07654 RPL23AP29-201ENST00000397284 453 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 RNU6-1077P-201ENST00000410506 102 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.25□□□□□ -2.21
TFF3Q07654 MTCO3P21-201ENST00000430791 643 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 GPM6BP3-201ENST00000442797 145 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.25□□□□□ -2.21
TFF3Q07654 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.25□□□□□ -2.21
TFF3Q07654 AC010683.1-201ENST00000473673 378 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.25□□□□□ -2.21
TFF3Q07654 AP005435.4-201ENST00000529514 284 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 MIR4452-201ENST00000583004 71 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC1.25□□□□□ -2.21
TFF3Q07654 AL133507.1-201ENST00000605269 557 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 AL356118.1-201ENST00000635272 1078 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
TFF3Q07654 AC073055.1-201ENST00000456901 1621 ntBASIC1.25□□□□□ -2.21
TFF3Q07654 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.25□□□□□ -2.21
TFF3Q07654 MTND5P10-201ENST00000603719 1809 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
TFF3Q07654 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TFF3Q07654 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TFF3Q07654 U8.1-201ENST00000362843 134 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 MIR1304-201ENST00000408243 91 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.24□□□□□ -2.21
TFF3Q07654 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.24□□□□□ -2.21
TFF3Q07654 RPL17P49-201ENST00000443728 411 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 AL360221.1-201ENST00000445989 335 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.24□□□□□ -2.21
TFF3Q07654 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.24□□□□□ -2.21
TFF3Q07654 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.24□□□□□ -2.21
TFF3Q07654 AC023790.1-201ENST00000482174 347 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 AC068781.1-201ENST00000488231 618 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 KLRA1P-201ENST00000503499 986 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.24□□□□□ -2.21
TFF3Q07654 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.24□□□□□ -2.21
TFF3Q07654 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.24□□□□□ -2.21
TFF3Q07654 DNAJC8P1-201ENST00000554535 372 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 AL135786.2-201ENST00000608422 615 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 AC006023.2-201ENST00000609916 167 ntBASIC1.24□□□□□ -2.21
TFF3Q07654 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.24□□□□□ -2.21
TFF3Q07654 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
TFF3Q07654 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.23□□□□□ -2.21
TFF3Q07654 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.23□□□□□ -2.21
TFF3Q07654 AC130650.2-201ENST00000618736 2403 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 CD24P4-201ENST00000382840 243 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 RNU6-997P-201ENST00000384725 107 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 AP002784.2-201ENST00000397300 549 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.23□□□□□ -2.21
TFF3Q07654 RPS6P15-201ENST00000431996 751 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.23□□□□□ -2.21
TFF3Q07654 MTND2P2-201ENST00000434633 945 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.23□□□□□ -2.21
TFF3Q07654 FO393415.2-201ENST00000480085 343 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 HMGB3P17-201ENST00000504195 649 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.23□□□□□ -2.21
TFF3Q07654 ATP5EP1-201ENST00000510257 156 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.23□□□□□ -2.21
TFF3Q07654 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.23□□□□□ -2.21
TFF3Q07654 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.23□□□□□ -2.21
TFF3Q07654 AL354943.1-201ENST00000572103 781 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.23□□□□□ -2.21
TFF3Q07654 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.23□□□□□ -2.21
TFF3Q07654 AP003117.1-201ENST00000602771 554 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 NUP58P1-201ENST00000502546 1738 ntBASIC1.23□□□□□ -2.21
TFF3Q07654 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.22□□□□□ -2.21
TFF3Q07654 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.22□□□□□ -2.21
TFF3Q07654 SNORA14A-201ENST00000364773 135 ntBASIC1.22□□□□□ -2.21
TFF3Q07654 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
TFF3Q07654 AL009174.1-201ENST00000426577 416 ntBASIC1.22□□□□□ -2.21
TFF3Q07654 Z85994.2-201ENST00000434327 452 ntBASIC1.22□□□□□ -2.21
TFF3Q07654 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.22□□□□□ -2.21
TFF3Q07654 AL121594.1-201ENST00000475906 575 ntBASIC1.22□□□□□ -2.21
TFF3Q07654 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.22□□□□□ -2.21
TFF3Q07654 RAC1P5-201ENST00000512182 576 ntBASIC1.22□□□□□ -2.21
TFF3Q07654 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.22□□□□□ -2.21
TFF3Q07654 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.22□□□□□ -2.21
TFF3Q07654 NDUFA5P6-201ENST00000542110 379 ntBASIC1.22□□□□□ -2.21
TFF3Q07654 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.22□□□□□ -2.21
TFF3Q07654 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
TFF3Q07654 AL162373.1-201ENST00000620433 407 ntBASIC1.22□□□□□ -2.21
TFF3Q07654 AC091932.3-201ENST00000624223 323 ntBASIC1.22□□□□□ -2.21
TFF3Q07654 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms