Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.37□□□□□ -1.71
IRF9Q00978 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.37□□□□□ -1.71
IRF9Q00978 SCARNA18-201ENST00000459004 134 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 SNORD108-201ENST00000459332 71 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AC116533.1-201ENST00000459748 321 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 RPL23AP2-201ENST00000471227 466 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 TRBV1-201ENST00000476502 284 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 MTCO1P29-201ENST00000496868 288 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.37□□□□□ -1.71
IRF9Q00978 AC002456.2-201ENST00000509356 380 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.37□□□□□ -1.71
IRF9Q00978 AC015795.1-201ENST00000513669 327 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 RN7SKP258-201ENST00000517151 304 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.37□□□□□ -1.71
IRF9Q00978 AP004371.1-201ENST00000525240 214 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.37□□□□□ -1.71
IRF9Q00978 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.37□□□□□ -1.71
IRF9Q00978 AP000763.2-201ENST00000540641 163 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 OR11H5P-201ENST00000554039 926 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.37□□□□□ -1.71
IRF9Q00978 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.37□□□□□ -1.71
IRF9Q00978 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.37□□□□□ -1.71
IRF9Q00978 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.37□□□□□ -1.71
IRF9Q00978 AC092747.3-201ENST00000603769 301 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AC104763.2-201ENST00000604179 382 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AC113139.1-201ENST00000605049 239 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AL670379.4-201ENST00000605279 254 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AL158032.1-201ENST00000605401 106 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 MIR1302-2-201ENST00000607096 138 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.37□□□□□ -1.71
IRF9Q00978 MIR6748-201ENST00000610433 71 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 SNX18P1Y-201ENST00000616231 511 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.37□□□□□ -1.71
IRF9Q00978 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
IRF9Q00978 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.37□□□□□ -1.71
IRF9Q00978 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
IRF9Q00978 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
IRF9Q00978 AC009812.4-201ENST00000569134 1805 ntBASIC4.37□□□□□ -1.71
IRF9Q00978 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
IRF9Q00978 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
IRF9Q00978 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.36□□□□□ -1.71
IRF9Q00978 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.36□□□□□ -1.71
IRF9Q00978 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
IRF9Q00978 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
IRF9Q00978 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
IRF9Q00978 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 RNA5SP28-201ENST00000363841 119 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 Y_RNA.301-201ENST00000364990 103 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 Y_RNA.419-201ENST00000384041 102 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
IRF9Q00978 AL354751.2-201ENST00000415471 210 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.36□□□□□ -1.71
IRF9Q00978 AC079780.1-201ENST00000428259 207 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 SAR1AP4-201ENST00000429225 591 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC4.36□□□□□ -1.71
IRF9Q00978 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.36□□□□□ -1.71
IRF9Q00978 RPL26P6-201ENST00000440913 438 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AC104058.1-201ENST00000448028 297 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.36□□□□□ -1.71
IRF9Q00978 Y_RNA.632-201ENST00000459189 102 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AC092324.1-201ENST00000468671 324 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 MTND4P17-201ENST00000470444 350 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 GMPSP1-201ENST00000514075 579 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 RNA5SP497-201ENST00000516081 97 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 RNU6-677P-201ENST00000516914 101 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.36□□□□□ -1.71
IRF9Q00978 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.36□□□□□ -1.71
IRF9Q00978 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
IRF9Q00978 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
IRF9Q00978 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.36□□□□□ -1.71
IRF9Q00978 MIR3942-201ENST00000585264 109 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.36□□□□□ -1.71
IRF9Q00978 DPPA3P3-201ENST00000603842 430 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC4.36□□□□□ -1.71
IRF9Q00978 uc_338.15-201ENST00000615470 191 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AL359547.2-201ENST00000615810 418 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.36□□□□□ -1.71
IRF9Q00978 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.36□□□□□ -1.71
IRF9Q00978 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
IRF9Q00978 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
IRF9Q00978 AC125257.1-201ENST00000560400 2930 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
IRF9Q00978 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.35□□□□□ -1.71
IRF9Q00978 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
IRF9Q00978 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
IRF9Q00978 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
IRF9Q00978 SNORD113-7-201ENST00000363762 77 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 RNA5SP235-201ENST00000365411 114 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 RNU6-629P-201ENST00000384061 103 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 RNA5SP397-201ENST00000391323 118 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 SDHCP2-201ENST00000398565 501 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
IRF9Q00978 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.35□□□□□ -1.71
IRF9Q00978 RNA5SP111-201ENST00000411386 101 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 AL139095.3-201ENST00000419672 1203 ntBASIC4.35□□□□□ -1.71
IRF9Q00978 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.35□□□□□ -1.71
IRF9Q00978 AC018644.1-201ENST00000429934 551 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms